Pyrus communis (pear): 137720621
Help
Entry
137720621 CDS
T10779
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox04120
Ubiquitin mediated proteolysis
pcox04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137720621
04120 Ubiquitin mediated proteolysis
137720621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137720621
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137720621
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137720621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
FlxA
zf-RING_16
zf-RING_5
zf-ANAPC11
zf-RING_11
zf_RING_Vps8
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
137720621
NCBI-ProteinID:
XP_068315810
LinkDB
All DBs
Position
16:269357..273025
Genome browser
AA seq
544 aa
AA seq
DB search
MMKLQTYAGISLVATLAIVYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVIMCTMWQL
TKKIFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVSFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPMLSHVRIVSFLGFLLVLDSLFLYSSVSNLIRTQKASVSLFFSFEYM
ILATTTVSTFVKYVFYVTDMLMEGQWEKKPVYTFYLELIRDLLHLSMYLCFFLAIFTYYG
VPLHLIRELYETFRNFKLRIADYIRYRKLTSNMNDRFPDATPEELNASDAICIICREEMT
TAKKLLCGHLFHVSCLRSWLERQHTCPTCRALVVPPDSGTGTAGGHRASRSDAHQQGTGT
MAQGGGVAGDSVSQHEARLRAAAAAASIYEKSHVYPSANRLVWSPGYAALPQVQRHTTDS
PNTESSGEASSGQSQPQLATPGGAANLSFSQFPPYMFVPGANVAYGGRLSSDPNLTASEL
EAQKKFLQHQIEILQNQLQVLQKPKPKESVDMGPTRPSLDGKGKSVAAPSSVSDCGRHED
RVDT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctgcaaacctatgccgggattagtttggtagcaaccctagcgattgtttat
catgcatttagtagtagaggtcagttttatccggcaatggtgtatttgtcgacgtcgaag
atcagcttggtgttgcttctcaacatgggtctggtcattatgtgtactatgtggcaattg
actaaaaagatcttccttggatcactccgggaagccgaggtggagaggcttaacgagcaa
tcatggcgggaagtcatggaaatcctctttgccattactattttcaggcaggacttttcg
gtctcgtttcttgctatggttactgctctgttgttgatcaaggctttgcattggttggct
cagaagagggttgagtacatcgagaccactccttccgtgcccatgctgtctcatgttcgg
attgtgtcctttttgggtttcttgcttgttctagatagtctctttttgtacagttctgtt
agcaacttgataaggacacaaaaggcctcggtttccctcttcttttcattcgagtacatg
atactagcaacaacaacagtgtcaacatttgtgaaatatgttttctatgttactgacatg
cttatggagggacaatgggagaagaagcctgtctacacgttctacttggaacttattcgg
gacttgcttcatttgtctatgtatttgtgcttcttcctcgcaattttcacatactatggt
gtgccactgcacttgatacgtgagctctatgaaacatttaggaactttaagcttcgcatt
gctgattacattcgttatcgaaagctcacatcaaacatgaatgatcgattcccagatgct
acgcctgaagagcttaatgcaagtgacgcgatttgtatcatttgccgtgaagagatgaca
acagccaagaaactattatgtggacacctttttcatgtgtcgtgccttcgatcatggtta
gagcgacagcatacctgccctacttgcagggctttagttgtacctcctgacagtggtaca
ggtacagctggcggacatagggcttcacggtcagatgctcatcaacaggggacaggcaca
atggctcagggtggtggagttgctggtgatagtgtgagccaacatgaagccaggctccga
gctgctgctgctgctgcatcgatatatgagaagtctcatgtatatccttctgcaaacaga
ctagtatggtctcctggatatgcggcacttcctcaggtacaaagacatacgactgactcc
cctaatactgaatctagtggagaagcttctagtggacaatcacagccgcagcttgcaacc
cctggtggagctgcaaacttgtccttctctcagttcccaccttacatgtttgtccctggg
gccaatgtggcctatggggggaggctgagcagtgatccaaatctgacagcttctgagctg
gaggcccagaaaaagtttcttcagcaccagatagagatactgcagaatcagctccaagtt
ttacagaaaccaaaacctaaggaaagtgtggacatgggtccaacaaggccatctttggat
ggcaaaggaaagagcgttgcagctccttcatctgtttcagattgtggacgtcatgaagat
cgggttgatacgtag
DBGET
integrated database retrieval system
