Pyrus communis (pear): 137720678
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Entry
137720678 CDS
T10779
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137720678
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137720678
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
137720678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-C3HC4_2
DUF6270
zf-C2HC5
zf-Nse
Motif
Other DBs
NCBI-GeneID:
137720678
NCBI-ProteinID:
XP_068315875
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All DBs
Position
16:13568847..13572484
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AA seq
386 aa
AA seq
DB search
MELTAIKDAFDRVTKKQKLSSSKAQEMFDLIDKEIKQTLQKLQSSNDRESQIDCKSAFAD
LKTKLQDIAPLSQLESTQKELNLALSKYPKILEKSFVPDISKAYRNIDFDTHTVNEIIGS
HFYRQGLFEVGDCFTSETGESESASAMKSQFQELFGILDAMKHRNLEPALNWAVFNSDKL
KPNGSDLLLKLHRLQFVELVQKGNRDRALQYSKACLAPFASDHMVEIQKLMGALLWTGRL
EHSPYSHLLSQANWDKVTGELTRQFCNILGQSYKSPLSVTMEAGIRGLPPLLKFMNVMAG
KRQEWQSMKQLPVPVDLDSEFHFHSIFVCPVSKEQSTEENPPMLMSCGHVLCKQSITKMS
KNGTKSFKCPYCPSDVNSAQCRPLVF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagctgactgccattaaagatgcatttgatcgtgttacaaagaaacaaaagctgtca
agctctaaagctcaagaaatgttcgatctgatcgacaaagaaatcaagcagacattacag
aagctacaatcatctaatgatcgtgaatctcagattgattgtaagtctgcatttgccgat
cttaaaaccaagttacaagatatagctccactcagtcagttggaaagcacgcagaaggaa
ctgaacctagcacttagcaagtatccaaaaattctggagaaatcattcgttcctgatata
tccaaggcttatagaaacattgactttgatacccacacagtcaatgagataattggcagc
catttctatcggcagggcctattcgaagttggtgattgttttacaagtgagactggggaa
tcagaatctgcatcggctatgaaatctcagtttcaggaattgtttgggatacttgatgca
atgaaacatcggaatctagagccagcactgaactgggccgtgtttaactccgataaactc
aaaccaaatggatcagacctattactgaaacttcacagactgcaatttgttgaattagtg
caaaagggaaatagagatagagctctccagtattcaaaagcttgtcttgctccttttgct
tccgaccatatggttgaaatacaaaagctcatgggggctcttctgtggactggaaggctt
gaacactccccatactctcacttattatcacaagccaattgggacaaagtgacgggggag
ctaaccaggcagttctgcaatattctgggccagtcttacaagagcccgttgagtgtgacc
atggaggcagggattcgtggtttgccacctcttctcaagtttatgaatgtaatggcagga
aagagacaggaatggcagtctatgaagcagttacctgtaccagtggatttagacagtgag
tttcatttccattctatttttgtgtgtccagtatcaaaggaacaatcaacagaagaaaat
ccacctatgttgatgtcatgtggacatgtgctctgcaagcagtctattacgaagatgtca
aagaacggtacaaaatctttcaaatgtccatactgtccttccgatgtcaattcagcacag
tgtaggccgcttgttttctga
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