Pyrus communis (pear): 137720791
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Entry
137720791 CDS
T10779
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00040
Pentose and glucuronate interconversions
pcox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137720791
Enzymes [BR:
pcox01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
137720791
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
137720791
NCBI-ProteinID:
XP_068316002
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Position
16:complement(8468089..8473552)
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AA seq
488 aa
AA seq
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MLLPTSCILLICFFLSALSRASYSFNLSLPHEHPDPDAVAHEVQRSVNASVSRRQKLSID
VKDQSQCLVGNPIDDCWRCEDWSNNRQKLADCGIGFGMDAMGGKGGLIYIVTDSSDSNPA
NPTPGTLRHAVIQTEPLWIIFSADMTIKLKCELIVNSFKTIDGRGYSVHVTGGGCITLQY
VSNIIIHNIHVHHCKPAGNTNVASSPTHVGWRGESDGDGISLFGAHKIWIDHCSLSFCAD
GLIDAIMGSTGITISNNYFAHHDEVMLLGHNDKYLPDSGMQVTIAFNHFGVALVQRMPRC
RRGYIHVVNNDFTRWEMYAIGGSANPTINSQGNRYTAPQDPNAKEVTKRVDTNEGDWSDW
NWRTEGDVMVNGAFFVPSGAGMSAQYAKASSIEPKSVTLIEQITANAGVFGDPREESSRV
TSPDDGTITDGGSGGSNGHGNGNDDDFFGMIFGNSARPSPNTIFLSLSIIFILYFTTKHG
DALLSLLL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcctaccagctgcattctcttaatttgtttctttctctctgctctctctaga
gcttcttactccttcaacctctccctccctcacgagcacccagaccctgatgcagttgct
catgaagttcaaaggagtgtcaatgcgtctgtttccaggcgccaaaagctgtccattgac
gtcaaggaccaaagccagtgccttgtcggcaacccaatcgacgattgctggcgctgcgag
gactggagcaacaaccgccaaaagctcgccgattgcggcatcgggttcggcatggacgcc
atgggaggtaaaggaggcctgatctacatagtcaccgactcgtcggattccaacccggcc
aacccaactccgggcacgctccgccacgccgtcatccaaaccgagcccctctggatcatc
ttctccgctgacatgaccatcaagctcaaatgcgagctcatcgtcaacagcttcaagacc
atcgacggccgcggctacagcgtccacgtcaccggtggcggatgcataaccctccagtac
gtctccaacatcatcatccacaacatccacgtccaccattgcaagcccgccggcaacacc
aacgtcgcctccagccccacccacgtcggctggcgtggcgagtcggacggcgacggcatc
tccctcttcggcgctcacaaaatctggatcgaccactgctccctctcgttctgcgctgac
ggattaatcgacgccatcatggggtcgaccggaatcacgatttccaacaactacttcgcc
caccatgacgaggtgatgctgttgggccacaacgacaagtacttgccggactccgggatg
caggtgacgatagcgtttaaccacttcggtgtggcgctggtgcagcgtatgccgcggtgc
agacgtgggtacatccacgtggtgaacaacgacttcacgcggtgggagatgtatgctatc
ggcggtagcgctaaccccaccatcaacagccaggggaaccggtacaccgctcctcaggac
ccgaacgcgaaggaggtgacaaagcgcgtggacacgaacgagggggattggtccgactgg
aactggaggacggagggggacgtaatggtaaatggcgcgtttttcgtaccgtccggcgcg
ggaatgagcgctcagtacgccaaggcctcaagcatcgagcccaagtccgtgactctcatt
gaacaaatcacggccaacgccggtgtctttggtgacccaagggaggaaagcagtcgcgta
acgagccccgatgacgggaccatcaccgatggcggcagtggaggatccaacggccacggc
aacggcaatgacgatgacttttttggaatgatatttgggaacagtgctcgaccaagccca
aacacaatattcttgtctctttcaattatttttattttgtactttaccaccaaacatggt
gatgctctattatcattactgttgtaa
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