Pyrus communis (pear): 137721030
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Entry
137721030 CDS
T10779
Name
(RefSeq) uncharacterized protein
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
pcox Pyrus communis (pear)
Pathway
pcox03013
Nucleocytoplasmic transport
pcox03015
mRNA surveillance pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137721030
09122 Translation
03013 Nucleocytoplasmic transport
137721030
03015 mRNA surveillance pathway
137721030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137721030
03041 Spliceosome [BR:
pcox03041
]
137721030
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137721030
Spliceosome [BR:
pcox03041
]
Complex C
Other components
EJC/TREX
137721030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
T4bSS_IcmS
Motif
Other DBs
NCBI-GeneID:
137721030
NCBI-ProteinID:
XP_068316254
LinkDB
All DBs
Position
16:16985581..16990431
Genome browser
AA seq
744 aa
AA seq
DB search
MSYQYPILGDRPINLLKVTELKEELKKRSLTTKGLKDDLVKRLDEAIRIEGENASTQDNR
LYGDKVVEPITVLAKTPRSTGSGGRKRTGKVDLPVQVDVNASATDLDQGGIQEGYVLVDK
DAGAIAEEELVVQSTIVETSVRVTETQVSEAAFVGDNSQNTEANKGIGNSQPLFDNEVPK
PLVENEDPKPVVENEDPKPIVENEDPKPQVEHEDPELYRKNEDPRPDLENEDPEPQLENE
NPNPQLENVDPKAQLEDEDSKPQLEKESLEPTDRDVMVNSSAPNYQVSEVSHLGFEVKYD
SISTDSVSINEKIELKDNIIADHVKLELDVNPEMVDPSSSTVVPVSGDSHPLDAEEPHQV
KASVGEKVDNNDTNADISKKNDSADVGYSEKLNLERSSGDDSMEEDVLDGKQIDSKYNSD
DVGEMCEKNDVPIVNEESHVDIVGDDISLDKMDENVEIKNHTAPPAEKRKLNDQAAVGSN
EPIKRRRWNSESLKVPELQSPIQKLTVTPKETFQTTGLKRNFSRSNSTMSEEAPKERVVP
PSQKAPTNSLRIDHFLRPFTLKAVQELLGKTGSVTDFWMDHIKTHCYVTYSSVEEALETR
NAVYNLQWPPNGGRLLAVEFVDPQEVQTRLQAFQTPAAPVGGGPVPVAATTSQPQPSPRQ
PRQQQLPPPASVPPPPPLPTAPPARERLPLPPPPPLPEKLDLPIVTLDDLFRKTKSTPRI
YYLPLSEEQVAEKLAAQQGRNTRQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaatatccgattcttggcgaccgaccaatcaaccttttgaaggttacagaa
ttaaaagaggagcttaagaagcgaagtttgacaaccaagggcttgaaggatgatttggta
aaacggttggatgaagcaatacgaattgaaggggaaaatgcttcgacccaggataacaga
ctttatggtgataaagttgtagagccaattacagttcttgctaaaacacctagaagcact
ggttctggtgggcgtaaaaggactggaaaagttgatttgccggttcaggttgatgttaat
gccagtgctacagacttggatcaagggggtattcaagaaggttatgttctggttgataaa
gatgctggtgccatagctgaagaggagctggttgttcaatcaactattgtggaaaccagt
gttagggtcactgagactcaggtgtctgaggcagcatttgttggtgataattcacagaac
actgaagctaataagggaattgggaattcacagcccctatttgacaatgaggttccaaag
cccctagtagagaatgaggatccaaagcccgtagtggagaatgaggatccaaagcccata
gtagagaatgaggatccaaagcctcaggtggagcatgaggatccagagctatatcgtaag
aatgaggatccaaggcccgacctggagaatgaggatccagagccccagctggagaatgag
aatccaaatccccagctggagaatgttgatcctaaggcccagctggaggatgaggattca
aagccccaactggagaaagagagtttagagcctacagacagggatgtcatggtcaactct
tctgctccaaactaccaggtatctgaggtcagccatttagggtttgaagtaaaatatgat
tctatttctactgattctgtgtcaattaatgaaaagattgaactaaaggataatataatt
gctgaccatgtcaaattagaattagatgttaacccggagatggttgacccatcatccagc
actgttgtcccagtcagtggtgattcacatccactggatgctgaagaaccacaccaggtc
aaagcttctgttggagagaaagttgacaacaatgatacaaatgcagacataagcaagaaa
aatgatagtgctgatgtggggtactctgaaaaattaaatttagagagaagttctggagat
gattctatggaagaagatgtgctggacggtaaacaaattgattcaaagtataattctgac
gatgtgggagagatgtgtgagaaaaatgatgtacccattgttaatgaggaaagtcatgtt
gatattgtgggagatgatatttccctggacaaaatggatgaaaatgttgagatcaagaat
catacagccccacctgctgagaaaagaaagcttaatgatcaagcagcagttggaagcaat
gagcctataaaaaggcgcaggtggaactctgaaagccttaaagttccagagctgcaaagt
cctattcaaaaactgacggtcacacccaaggaaactttccagaccaccggtttaaagcgt
aacttttcgagatcaaactctactatgagtgaggaagctcccaaagaacgtgttgttcca
ccatcacagaaggctccaactaattcccttagaattgatcattttctgcgacctttcacc
ctgaaagctgtgcaagaacttctaggaaaaaccgggtctgttactgatttctggatggac
cacatcaaaactcattgctatgttacttattcatcagtggaagaagccttggagacacgg
aatgctgtgtataacctacagtggcctcccaatggtgggcgcctcttagcggttgagttt
gttgatcctcaggaagtgcaaacacggcttcaggcttttcagactcctgctgcacctgtc
ggcggtggtcctgttcctgttgccgcgaccacctcacagccgcagccttctccccgtcaa
cctaggcagcagcagcttccaccacctgcttctgtccctcctccaccacccttgcctaca
gctcccccagcaagagagcggcttcctctgcctcctccaccacctctaccggagaagctt
gatcttccaattgtcaccttggatgatctctttcggaaaaccaagtcaactccccgaatc
tattacttgcctttgtcagaagaacaagtggctgaaaaacttgcagcacaacagggaaga
aatacgaggcagtag
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