| Entry |
|
|---|
| Name |
(RefSeq) serine/arginine-rich splicing factor SR45-like isoform X1
|
|---|
| KO |
| K14325 | RNA-binding protein with serine-rich domain 1 |
|
|---|
| Organism |
pcox Pyrus communis (pear)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:pcox00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137721360
03015 mRNA surveillance pathway
137721360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pcox03019]
137721360
Messenger RNA biogenesis [BR:pcox03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
137721360
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
2:complement(9437370..9443354)
|
|---|
| AA seq |
399 aa
MAKPTRARRSPSGSVSGSSSRSRSRSYSGSDSLSSSRSRSRSRSRSFTSSSSPSRSGSSR
SRSPPASKKSPEVARRGRSPPPQSKKASPPPRKASPVHQSLVLHIDALTRNVHEGHLREI
FCNFGEVVNVELAMDRTVNLPKGFGYVEFKTRADAEKAQLYMDGAQIDGNVVRAKFTLPQ
RQKVSSPPKPVATAPKRDAVKTDGASADKDAPRRPREASPRRRGVPSPRRRSPVGRRGES
PRRPLDSPPRRRAASPARPYRHGGSPPRKRLASPPRGRSGSPPPRRRSPVRRIRGSPIRR
RSPGPPRRRSPPRRFRSPPRRSPIRRRSRSPIRRPGRSRSRSISPRRGRGPATRRGRSSS
SGSPSPRKAPRRISRSPRRPLRGRSSSKSSTSSSPPRKP |
|---|
| NT seq |
1200 nt +upstreamnt +downstreamnt
atggcgaagccaacccgagcccgtcgctcgccatctggctccgtgtccggctcatcctcc
cggtcccgttcccgctcctactcaggctccgactccctctccagctcgcgttctcgctct
cgatctcgctccaggtccttcacctcttcctcctctccgtcccggagcggcagctctcgc
agccgaagtccccctgcctcaaaaaaaagtcctgaagttgcaagacgaggtcgttctcca
ccaccacagtctaaaaaggcgtcaccgcccccaaggaaagcttctccagttcatcagtca
cttgttcttcacattgacgcgcttacgaggaatgtgcatgaaggccatttacgagaaata
ttctgtaactttggtgaagttgtcaatgtggagctggcaatggatcgtactgttaatctt
ccaaaaggatttggatatgttgagttcaaaacacgagcagatgctgaaaaagcacaatta
tacatggacggcgctcaaatcgatggtaatgtcgttcgagcaaagtttacattacctcaa
cgtcagaaggtgtcttctcctcctaagcctgttgccactgctccaaagagagatgctgtg
aaaactgatggtgctagtgctgacaaagatgcaccaaggcgaccgagggaagcttctcct
cgtcggagaggtgttccctcaccacgaaggagatcacctgtcggtcggagaggtgaatct
ccaagacgaccattagattctccaccacgtcgtcgtgctgcctcgcctgctcgtccctac
cgccatggtggttcacctccaaggaaaaggcttgcatctccacccagaggtcgttctgga
tcgccgccaccaaggcgacgttcccctgttagaaggatacgaggcagtcccattcgtaga
cgctctccaggacctccaaggcgccgttcacctcctagacggtttcgtagtcctcccaga
aggtctccaattcgtaggcgttcccgttctcccattcgtaggcctggtcgatcccgttca
aggtcaatctcgccgcggagaggtcgaggaccagctactagacgtgggaggtcatcatca
tctggatcacctagtccacgaaaggcaccccgaagaatctctcgcagtccgagaaggcct
ttgagaggaagaagcagtagcaagagcagcaccagcagttcaccccctcgtaagccatag |
|---|
