Pyrus communis (pear): 137721476
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Entry
137721476 CDS
T10779
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28-like
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137721476
03009 Ribosome biogenesis [BR:
pcox03009
]
137721476
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137721476
Spliceosome [BR:
pcox03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
137721476
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
Pre-60S particles
Helicases
137721476
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
137721476
NCBI-ProteinID:
XP_068316671
LinkDB
All DBs
Position
16:complement(11783761..11790898)
Genome browser
AA seq
747 aa
AA seq
DB search
MTPSFVFEPPSDEEYSDEEQGLGDGNFQSSWDFASYSEIVSQDHAHGSTTSVNFKIKKAL
QQQPISHHNTADEDNESNKQEDCNQLDSSDEEDQEEAFNDDHAKPTPIQTEDKDKEEGDD
APPNAADDNNKPFFAPSEGVLFHANSFMELNLSRPLLRALEKLGHTKPTPIQAACIPVAL
AGRDICGSAITGSGKTGAFALPTLERLLYRPKRLPAIRVLVLTPTRELGVQVLSMIEKLA
QFTDIRCCQAIGGLPMKEQEIALRSKPDIVVATPGRIIDHLHNSMSVDLEDLAVLILDEA
DRLLEIGFSAEIRELIRLCPKRRQTMLFSATMTTEVDELVKLSLTKPLRLSADPSAKRPV
ALTEEVVRIRRMREVNKEAVLLALCSKTFTSRVIIFSGTKVAAHRLMILFGLAGLKAAEF
HANLSQPQRLHALELFRKKEVDFLISTELIARGIDIDGVQTVINYDCPTNLSSYVHRVGR
TARAGRDGYAVTFVTDNDRSLLKSIEKRVGSKLKSPIVAEQSITKWSQVIEEMEDQVAAI
LLEEREEQALRDAEREVTKAENMIVHKDEIFSRPKKSWFQSENDKKKVVHAAKASLGREK
RCGNDVISAQQAEDIKMKEKRKREREKNLPRKIRRKLEAAREMLEDENQLKGSDKFKEKT
GMPLVDLAYRRAKAMKAAQKTTDAGMTLKKSSKRCNLPSRRTQSRTDEMRDLFHSDITER
KHNRKLGGTGMKKSKNSFKSNSRCKRR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgactccgagtttcgtatttgaacccccaagcgatgaagaatattccgatgaagagcaa
ggtcttggcgatggcaattttcaatcctcatgggacttcgcatcttactctgaaatagtc
tcccaagaccatgcccatggaagcaccacctccgtcaatttcaaaattaagaaagctttg
cagcagcaaccaatctcacaccataacactgctgacgaagacaacgaatccaacaaacaa
gaagattgtaatcagctagattccagtgatgaagaagaccaggaggaagcttttaatgat
gaccatgcgaagcccactccaattcagactgaagacaaagacaaagaggaaggcgatgat
gctcctcctaatgctgccgatgacaataataagcccttttttgccccatcagagggagtt
ttgtttcatgcaaattcatttatggagttgaacttgtctcgccctttgcttcgcgcttta
gagaaattgggccataccaaacccactccaattcaggcagcatgcataccagtggccctt
gctggtcgtgacatatgtgggagtgccattactggttccgggaagactggtgcttttgcg
ttaccaactttggagagactgttgtatcgccccaagcggctgccagctataagggtcctt
gttttgactccgacaagggaacttggggttcaggttctgagtatgattgagaaacttgct
cagttcacggatatcagatgttgccaggctattggagggcttccaatgaaggaacaagag
atagccttgagatcaaagccagatattgttgtagctactccaggacgcattatagatcat
ttacacaattctatgtctgtggatttggaagatcttgctgttctaattcttgacgaggct
gatcgacttttagagattgggtttagtgctgaaattcgtgagctgattcgtctatgcccc
aaaaggagacagaccatgctattttcagctacgatgactactgaagttgatgaacttgtc
aagctttctcttaccaagccactacgtctctcagccgacccatctgctaaacggccagtg
gcactaacggaggaggtggtcaggatacgacgaatgcgtgaagtaaataaggaagcagtt
ctacttgcactgtgttcaaagacattcacttctagagtgatcatattcagtggcacaaaa
gtagctgcgcataggttgatgatattatttgggttagctggcttaaaagctgctgagttt
catgcaaacctttctcaaccccagcgcctacatgctttggaactctttcggaagaaggaa
gttgattttttgatttcaactgaattgattgcccgcggcattgacatagatggtgttcag
actgttatcaactatgactgtcctacaaatctttcaagctatgttcatcgagtgggacgt
acagcaagggctggcagagacggatatgctgtaacttttgtgacagataatgaccggtct
cttttaaaatccattgaaaaaagggttggttcaaaattgaagagtccaattgttgctgaa
caatcaattaccaagtggtcccaggttattgaggaaatggaagatcaagtggctgcaatt
cttctagaggaaagggaagaacaagcactaagagatgctgaaagggaagtaacaaaggca
gagaatatgatagtacacaaagatgaaatcttttcacgtccgaagaagtcctggtttcag
tcagaaaatgataagaagaaggtagtgcacgcagcgaaggcatcccttggaagagaaaag
cgttgtggaaatgatgtaatcagtgctcagcaagccgaagacataaaaatgaaagaaaag
aggaagagggagcgtgagaaaaatttgcctcgcaagatacgccggaaattggaagcagct
agagaaatgttagaggatgaaaatcagctcaaaggcagtgacaagtttaaagagaagaca
ggaatgccacttgttgaccttgcttacagacgggcaaaagccatgaaggctgcacaaaaa
acaacagatgctggcatgactttgaagaagtctagcaagagatgtaatcttccttcacga
agaactcagtctaggacagatgagatgcgggacctgttccacagtgacataactgaaagg
aagcataacagaaagcttggtggaacgggaatgaaaaagtccaagaattccttcaagagc
aactcaaggtgcaaacgcagataa
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