Pyrus communis (pear): 137722267
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Entry
137722267 CDS
T10779
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC2A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcox04131
]
137722267
04121 Ubiquitin system [BR:
pcox04121
]
137722267
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137722267
Membrane trafficking [BR:
pcox04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
137722267
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
137722267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Prok-RING_1
HypA
Rad50_zn_hook
DUF7573
Zn_ribbon_8
DZR
zf-P11
Motif
Other DBs
NCBI-GeneID:
137722267
NCBI-ProteinID:
XP_068317334
LinkDB
All DBs
Position
17:complement(13761292..13763020)
Genome browser
AA seq
355 aa
AA seq
DB search
MASMAASSYWCYTCNRSIQVRVRTQDSILCPDCGAGFIEEIPTPTRSSPLHHPFPTAAMF
LDSAPVSQSPSPPRLRRNQRSGRDRSPFNPVIVLRGPPDTESDPGSFELFYDDGAGLGLR
PLPSSMSDILMGSGFDRLLHQLTQLENGVARLDHPPASKAAIESMPVIKIADSHVSTESH
CAVCKEAFELDSEAREMPCKHIYHSDCIFPWLSIRNSCPVCRHQLPTDVRGPRGSGRASP
ENNGVVGEEEPVGLTIWRLPGGGFAVGRFTGGRRAAERELPVVYTEMDGGFNTAGAPRRI
SWASRRRARESGGFAQAFRNFFSFFGRLRSSRSRSGNVFSRSSRRRSQRWALEDN
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcttccatggcagcatcctcctactggtgctacacgtgtaaccgatcgattcaagtt
cgggttcggactcaagattcgatcctctgccccgattgcggagctgggtttattgaagag
atcccgaccccgacccgatcttctccgctacaccacccatttcccaccgccgcgatgttc
ctcgacagcgccccggtttctcagagcccgagcccgcctagacttcgccggaatcagaga
agcggccgcgatcggtccccgtttaacccggtcatcgttctccggggcccacctgatact
gaatctgacccgggaagcttcgagctgttctacgatgacggagccgggttaggcctccgc
ccgcttccgtcgtccatgtcggatatcttaatggggtcgggtttcgaccggttgctccac
cagttgacccaattggaaaatggcgtcgcgcggctggaccaccctccggcatccaaagcc
gcaatcgagtccatgcccgtcattaaaatcgccgacagccacgtctcgacggagtcgcac
tgtgccgtttgcaaagaggcattcgagctcgactcggaagctcgcgagatgccgtgtaag
cacatctaccactcagattgtatcttcccgtggctttcaatccgcaattcatgcccggtt
tgccggcaccagctcccgactgatgtgagaggccctcgcggcagtggcagagcatcgccg
gagaacaatggcgtggttggagaagaagagccagtggggttgactatttggagattgccc
ggtggtggatttgccgtggggaggttcactggaggcagaagagccgcagagcgtgagctc
ccagttgtttacaccgagatggatggtgggttcaatacggcgggtgctcctaggaggatt
tcatgggcatctagaagaagggccagagagagtgggggatttgctcaggcttttcgcaat
ttcttctcttttttcgggaggctgagaagctcgagaagtcggtctggtaatgtgttcagt
agatcatcgcggcggaggagccagcgttgggctttggaagacaactga
DBGET
integrated database retrieval system
