KEGG   Pyrus communis (pear): 137722361
Entry
137722361         CDS       T10779                                 
Name
(RefSeq) E3 ubiquitin-protein ligase ATL6-like
  KO
K10664  E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]
Organism
pcox  Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcox04121]
    137722361
Enzymes [BR:pcox01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     137722361
Ubiquitin system [BR:pcox04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    137722361
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-C3HC4_2 zf-rbx1 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-ANAPC11 zf-RING_16 zf-C3HC4_3 Prok-RING_1 PHD zinc_ribbon_16 zf-Nse DUF805 DNA_ligase_ZBD RINGv Baculo_RING DUF1272 Prok-RING_4 zf-RING-like PHD_NSD Zn_ribbon_IFT122_C
Other DBs
NCBI-GeneID: 137722361
NCBI-ProteinID: XP_068317447
LinkDB
Position
17:complement(19288275..19290319)
AA seq 372 aa
MAPLLSCAAKHVVLALFLLFLLSPVGAQPSPDGSDPYQYQRFSPPLAIIIAVLIAALFLM
VFFSVYVRRCSDTYQADSVRAGASHTGRSRRGAASRGLDTAVLDTFPTLDYAEIKGLKIG
KEALECAVCLNEFEDDEMLRLIPKCDHVFHPDCIDVWLMSHTTCPVCRANLVPQPGDAAP
QLTDLGSEQQEGDVEAQNDAVDAERERDDLGMLAQQEPEVLNINQTLNRNRTRGSRSSRL
RRLFSRSHSTGHSAVQPGEDTERFTLRLPVEVRKQIMNRKLNRSTSLLVLPREGSSRRGP
RTGESSSINRVRSYRRLEPLDRQFRSDRWVFNKTPPFLTRMSSRSSPKVAAIDGETPAVP
EMSRSSSARPPV
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggctccgctcttatcctgcgccgccaagcatgtggtcctcgctctcttcctcctcttc
ctcctctcaccggttggagcccagcccagtccggacgggtccgacccctaccagtaccag
cggttcagcccgccgttggccatcatcatcgccgtactgatcgccgccctcttcctcatg
gttttcttctcagtctacgtccgccgctgctccgacacctaccaagccgacagcgtccgc
gccggcgcctcccacaccggccgatcccgacgaggcgcagcctcacgcggtctcgacacc
gccgtcctcgacaccttccccacgcttgactacgccgagatcaaggggcttaaaataggg
aaagaggcgctcgagtgcgccgtctgcttaaacgaattcgaggacgacgaaatgctgcgt
ttgatccccaaatgcgaccacgtgttccaccctgactgcatcgacgtgtggctgatgtcg
cacaccacgtgtcccgtgtgccgggccaacctcgttccgcagcccggcgacgcggcacca
caactcactgacttgggatccgagcagcaggagggcgacgtcgaagctcaaaacgacgcc
gtagacgcggaacgggagagagatgacctgggaatgctagcacagcaagagcctgaggtg
ttgaacataaaccagacgctcaatcggaaccgtactcgtggatcgagatcgagcaggctg
cggagattgttctcgcgctcacactcgaccggacactctgcggtccaaccgggagaagac
actgagcggttcaccttgaggttaccggttgaagtcaggaaacagattatgaaccggaag
ctgaaccggtccactagcttattggtcttgccccgagaagggagttcgaggcgtgggccc
cgaaccggtgagagtagcagtattaatagagtgaggagctacagaaggctcgagccgttg
gaccggcaatttagatcggaccggtgggtgttcaacaaaacgccaccatttctcacaagg
atgtcaagtcgttcgtcgccgaaagtggcggcaattgacggtgagacaccggccgtgccg
gaaatgtctaggagcagttcggctcggcctccggtttaa

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