Pyrus communis (pear): 137722526
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Entry
137722526 CDS
T10779
Name
(RefSeq) protein transport protein SEC16B homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcox04131
]
137722526
Membrane trafficking [BR:
pcox04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
137722526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
137722526
NCBI-ProteinID:
XP_068317651
LinkDB
All DBs
Position
17:complement(9001537..9008949)
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AA seq
1423 aa
AA seq
DB search
MASNPPPFQVEDLTDEDFFDKLVEDDLRPSESGPEFGQGNDSDDGKAFANQSIGSSVVVS
EDSGHETKTTDENKLFVNPSVGDSAAVSEDSAAKPQTKEEKGAEEFNSFVFDSVIESNNA
VDNNAVIESNNGGEAVTSQLRLDSTVSKSNESGASGVKEIGWSSFYADSGDNGIHGFGSY
SDFFSELGDGSGDFRTKIDGSLSTESKTVLNNEDQTAHQEGLNHLVSNEQCQEGQVYGGS
EQDLNSTEYWESLYPGWKYDANTGQWYQVDSFDVPANAQGSVGTDDWTTISDGNKTEVSY
FQQTAQSAAGTVTETSTTGSLSNWDQVSQETNGYPEHMVFNPEYPGWYYDTIAQEWRSLE
AYSSSVQSTAQSQSRNSIYGQEYRQDDNYGPQAVVGNQGQDSNWAGSYSKYNQHASNMWQ
AQTAAKSEGFSGFSGKQKQSNSFGSTVNTDQHMSLNSFGAVPLYNKAIQGHGSANETVGF
QSFVPAGNFSHQFNQGNAKMSEQTQFSDDYYGAQKPLSYSQQPLNYSQPPFQSGNQFSYA
PSVGRSSAGRPPHALVTFGFGGKLILMKDNSSLRNPLYGTQDPVGGLVSVLNLMEVLTGK
TDPSSFGRSTCDYFRALCQQSFPGPLVGGSVGSKELNKWIDERIANCESPDMDYRKGKVL
RLLLSLLRIACQHYGKLRSPFGTDTVSRENDTPESAVAKLCASAKSNNVQFSDYGSVSHC
VQKTPSEGQLQATASEVQNLLVSGRKKEALQCAQEGQLWGPALVIASQLGEQFYVDTVKQ
MALRQLVAGSPLRTLCLLIAGQPAEVFSADTTAEVNLPGAANTSQQPAQFGANKMLDGWV
ENLAVITANRTKDDELVIIHLGDCLWKDRSEITAAHICYLVAEANFESYSDSARLCLIGA
DHWKSPRTYANPEAIQRTELYEYSRVLGNSQFILLPFQPYKLIYAHMLAEVGRVSDSLKY
CQTIIKSLKTGRAPEVETWKQLVLSLEERIKTHQQGGYSVNLVSTKFVGKLLNLFDSTAH
RVVGGLPPPAPSTSQGSAHGNDHYQQPTGPRVSSSQSTMAMLSLIPSASMEPISDWTSDG
NRKPMHNRSVSEPDFGRTPRQVDSSKQTASPDAQGKSSGGSRFSRFGFGSQLLQKTVGLV
LRPRPGKQAKLGETNKFYYDEKLKRWVEEGVEPPAEDTVLPPPPTCTPFQNGVSDYNLRS
VLKKEGSPTKGSPDLQTSTPPGPTSGTPPIPPSSNQFSSRGRLGIRSRYVDTFNQGGGSP
VNSFESPSVPSVKPLVAANAKFFIPTVAPSNERAMEAIAESVQEGGATNENPSTFGMNDS
FHTPPPSSSSSNTMQRYPSMGNIQSMGVATTSNGSAPPHSRRTASWGGSSNDVLSPPMEM
GEIKPLGEALGMSPAMFRPSELSLTRTQMNGGSFGDDLHEVEL
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaatcctcctccatttcaggtggaggatctgacggacgaggatttctttgat
aaattggttgaagatgatctgaggccctccgaatcaggccccgaatttggccagggaaat
gattccgatgacggtaaggcgttcgcaaatcagagtattggtagctctgtagttgtatct
gaggattcgggccacgaaaccaaaactactgacgaaaataagctgttcgtaaatcccagt
gttggtgattctgcagctgtatctgaggattcggctgccaaaccccaaacgaaagaggaa
aaaggtgcagaagaatttaattcattcgtgttcgatagtgtaattgagtcgaataatgcg
gttgataataatgcagtgatcgagtcgaataatggtggggaggcagtgacatcccagttg
aggttggattcgacagtgagcaagagcaacgagtcgggagcttcaggggttaaggagata
gggtggagttctttttatgccgattcgggggataatgggatccatgggtttggatcgtac
tcagattttttcagtgaattgggggatggttcgggggattttcgcacgaaaatagacgga
agtttgagtactgaatcgaaaactgtactcaataatgaagatcaaacagcccatcaagag
ggtttgaaccatttggttagtaacgagcaatgtcaagagggtcaagtttatgggggaagt
gagcaggatctaaacagtacagagtattgggaaagtctctatccagggtggaagtatgac
gctaacacggggcaatggtatcaggtggacagtttcgatgtgcctgcaaatgctcaaggg
agcgttggcactgatgattggaccactatttctgatggtaataagaccgaggtttcttat
tttcagcagacagcacagtctgctgccggaactgtgactgaaaccagcacgactggcagt
ttgtcaaactgggatcaggtctcacaggagacaaatgggtacccggaacatatggttttc
aatcccgaatacccaggttggtattatgacacaattgcccaagaatggcgctcattggaa
gcatatagctcctctgtgcaatcgactgctcagtcccagagtagaaatagtatatatggt
caagagtacaggcaagatgacaattatgggccacaagcggtcgtcgggaaccaaggtcaa
gacagcaactgggctgggtcctacagtaagtacaatcagcacgcctcaaatatgtggcaa
gctcaaactgcagctaaaagtgaggggttttcaggttttagtggaaaacaaaaacagagt
aattcgtttggttctacagttaacacggatcagcacatgtctttaaattcttttggagca
gttcctttgtacaacaaagcaattcaaggtcatggttcagctaatgagactgttgggttc
cagagtttcgtcccggctgggaactttagccaccagtttaatcaaggaaatgcaaagatg
agcgaacaaacacaattctcagatgattactatggcgctcagaaacctttaagctactca
cagcaacctctaaattattcacaaccacctttccagagtggcaatcagttttcatatgct
cccagcgtaggaagatcatctgctgggcgccctccgcatgccctagtaacttttggattt
ggtggaaaactcattttaatgaaggacaatagtagcctcaggaatccgttatatggaacc
caggatcctgtaggaggcttagtttctgtcctgaacttaatggaagttttaacgggaaag
actgatccttcgagttttggaaggagtacttgtgattattttcgtgctttgtgccaacaa
tcattcccaggtcccttggttggagggagtgttggaagcaaagagctgaataaatggatt
gatgagaggattgctaactgtgaatcgccagacatggactataggaaaggcaaagtattg
aggttgcttctttctttgcttaggatagcttgtcaacattatggaaaacttcgatctcct
tttggtaccgacactgtatcaagggaaaatgatactccagaatcagcagttgctaaactt
tgtgcatctgcaaagagcaataatgtgcaattcagtgattatggctctgttagccactgt
gtgcagaaaacaccttcagaaggacaattgcaagcaactgcttctgaggtacaaaatctt
ctggtttctggtagaaagaaagaggctttacaatgtgcacaagaaggtcagttgtgggga
cctgcgcttgttatcgcttcacagcttggagaacagttctatgttgatactgtgaagcaa
atggcacttcgccagctggttgcaggatcacctttgcggactttatgcctgctaattgct
gggcaacctgctgaagtattctctgctgacactacagctgaggtcaatcttccaggcgct
gctaatacatctcagcagcctgcacagtttggtgcaaataaaatgcttgatggctgggtg
gagaatttggctgtgataactgcaaacagaacaaaagatgatgaactggttattatacat
cttggagattgcttatggaaggataggagtgagattactgcagcacacatctgctattta
gtggcagaagcaaattttgagtcatactcggatagtgcaaggctatgtctaattggagca
gatcactggaagtcacctcgaacttatgctaatccagaggccattcagaggactgaactc
tatgaatattcaagggtgcttgggaactctcagttcattcttctaccatttcagccatat
aagctcatatatgcacacatgcttgctgaagttggaagagtttctgactcgttgaagtac
tgtcaaacaataataaagtctttgaaaactggtagagcacctgaagtggaaacgtggaag
caactagtattatctcttgaggagaggattaaaacccatcagcaggggggatactctgta
aatttagtttctacaaagtttgtaggtaaattgctcaacttgtttgatagtactgcacat
cgtgttgttgggggcctaccaccacctgcaccgtccacatcccaaggaagtgctcacggt
aatgaccattaccaacagcccacaggccctagagtttctagtagtcaatcaacaatggcc
atgttgtcattaattccttctgcttcaatggaacccataagtgactggacatctgatggc
aaccgaaagccaatgcataatagaagtgtttcagagccagattttggcagaactccaaga
caggttgattcatcaaaacaaacggcctcacctgatgcccaaggaaaatcctcagggggt
tctcgcttttctcgttttggtttcgggtcacagctcttgcaaaagactgttggtttagta
ttaagaccccgcccaggaaaacaggctaagttgggtgaaacaaacaagttctactatgac
gaaaaacttaaaagatgggttgaggaaggtgttgaacctccagctgaagataccgtgttg
cctcctcccccgacatgtacaccctttcagaatggtgtctctgattacaacttgagatct
gttttgaagaaagaagggtctcctactaagggcagcccagatttacaaacttcaacccct
ccaggaccaacttcagggaccccacctattccacctagctcaaatcaattctcatcccgt
ggacggttgggtattcgatccagatatgtcgacacattcaaccaaggtggtggaagccca
gtaaactcgttcgagtcaccttctgttccatccgttaagcctcttgttgctgccaacgca
aagttttttattcccacggtagcaccatcaaatgaacgggcaatggaggctattgctgaa
agtgtacaagaaggtggtgcaactaatgaaaatccttcaacattcggtatgaatgattca
ttccatactcctccgccttcatcgtcgtcatcgaataccatgcaaaggtacccaagcatg
ggtaatattcaaagtatgggagttgccacaacttccaatggctctgctccaccccactca
cgaaggacggcctcatggggtggaagctccaatgatgtattaagccctcctatggaaatg
ggtgagataaaacctctaggggaggcgttaggcatgtccccggcaatgtttaggccgagt
gagctttccctgacacgcacccaaatgaatggaggcagttttggtgatgaccttcatgaa
gtggaactttga
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