KEGG   Pyrus communis (pear): 137723390
Entry
137723390         CDS       T10779                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03030  DNA replication
pcox03410  Base excision repair
pcox03420  Nucleotide excision repair
pcox03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    137723390
   03410 Base excision repair
    137723390
   03420 Nucleotide excision repair
    137723390
   03430 Mismatch repair
    137723390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pcox03032]
    137723390
   03036 Chromosome and associated proteins [BR:pcox03036]
    137723390
   03400 DNA repair and recombination proteins [BR:pcox03400]
    137723390
DNA replication proteins [BR:pcox03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    137723390
  DNA Replication Termination Factors
   ELG1-RFC complex
    137723390
Chromosome and associated proteins [BR:pcox03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    137723390
DNA repair and recombination proteins [BR:pcox03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     137723390
  Check point factors
   HRAD17(Rad24)-RFC complex
    137723390
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_14 nSTAND_NTPase5 AAA_22 Rad17 Mg_chelatase AAA_lid_RFC1 AAA_16 Viral_helicase1 RCF1-5-like_lid AAA_5 AAA_11 RuvB_N nSTAND3 AAA_assoc_2 AAA_25 AAA_19 AAA_28 ABC_tran DNAX_ATPase_lid AAA_24 AAA_30 MeaB RNA_helicase bpMoxR AAA_18 IstB_IS21 KTI12 DO-GTPase1 NTPase_1 AAA_3 AAA_7 SLFN-g3_helicase FtsK_SpoIIIE SRP54 NitG AAA_29
Other DBs
NCBI-GeneID: 137723390
NCBI-ProteinID: XP_068318684
LinkDB
Position
17:5640627..5644437
AA seq 330 aa
MALSSSSSAYDMPWVEKYRPTKVADIVGNEDAVSRIQVIARDGNMPNLILAGPPGTGKTT
SILALAHELLGPNYKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPSGRHKVVILDEAD
SMTSGAQQALRRTMEIYSNSTRFALACNTSSKIIEPIQSRCALVRFSRLTDEEILGRLMI
VVQAEKVPYVPEGLEAIIFTADGDMRQALNNLQATNSGFRFVNQENVFKVCDQPHPLHVK
NMVRNILEGKFDDACSGLKQLYDLGYSPTDIITTFFRIIKNYDMAEFLKLEFMKETGFAH
MRICDGVGSYLQMCGLLAKLSLVRETAKET
NT seq 993 nt   +upstreamnt  +downstreamnt
atggcgttgtcttcttcttcgtcagcctacgacatgccgtgggtggagaagtacaggccc
accaaggtcgccgacattgtgggcaacgaagacgccgtgtccagaatccaggtcatcgct
cgcgacggcaacatgcccaacctcatcttagccggtcctcctggaactggtaagaccact
agcatactggctcttgcacatgagcttttgggaccaaactataaggaggctgttttagag
ctgaatgcatcagatgacaggggaatcgatgttgtgaggaacaaaattaaaatgtttgct
caaaagaaagttacactgccttccggacgccataaagttgtcatattggatgaagctgac
agcatgacatctggagcacaacaagctttgaggcgaacaatggaaatatattcaaattct
actcgtttcgctcttgcgtgcaatacatcttccaaaatcattgagcctattcagagtaga
tgtgcccttgtccggttttctagattgactgatgaggagatacttggtcgcctaatgatt
gtcgttcaagctgagaaggttccatatgttccagaaggtcttgaagccattattttcacc
gctgatggtgatatgaggcaggcactgaataacttgcaagctacaaacagtggattccgg
tttgtgaaccaagaaaatgttttcaaggtctgtgaccagcctcacccattgcatgtaaag
aatatggtgcgcaacatactggaagggaaatttgatgatgcttgttcgggtctcaagcag
ctctacgatctgggttactccccaacagacataatcacaacctttttccgtatcataaaa
aactatgatatggctgagtttttgaaattggagttcatgaaggaaactggatttgctcac
atgagaatctgtgatggagttggctcgtaccttcagatgtgtggtcttctggctaagctt
tccctagttcgtgaaaccgcgaaggaaacataa

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