Pyrus communis (pear): 137723655
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Entry
137723655 CDS
T10779
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137723655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137723655
Spliceosome [BR:
pcox03041
]
Common components
Common spliceosomal components
SR proteins
137723655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
137723655
NCBI-ProteinID:
XP_068318953
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All DBs
Position
17:18759655..18764009
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AA seq
271 aa
AA seq
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MSRRSSRTIYVGNLPGDIRMREVEDLFLKYGPIVDIDLKIPPRPPGYAFVEFEDPRDADD
AIYGRDGYDFDGFRLRVELARGGRHSSSDRYSSYSRSSSSRGVSRRSDYRVLVTGLPPSV
SWQDLKDHMRRAGDVCFSQVFRDRGGMTGIVDYTNYEDMKYAIRKLDDSYIRVREYDSRR
SYSRSPSYDYRRSYSRSPSRTPYMSRSPSVSRSYSYGGRSRSISPEATYSRSRSRSWTRS
RSPNSSPRPRTLSRPRSRSRSLSQSLSPYAR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacgatcgagtcgcactatctacgtgggtaatctgcccggagatattcgtatg
agagaagttgaagatttgtttctcaagtatgggccaattgttgacattgatctcaaaatc
cctccgagaccgccaggttatgcttttgttgaatttgaagatcctcgtgatgctgatgat
gcaatttacggccgggatgggtatgactttgatgggtttcgtttacgggttgaattagcg
cgtggtggccgacactcctcatcagatcgctacagcagttacagtcgtagtagcagtagc
cgtggtgtttcccggcgctctgactatcgtgtactggtcactggattgcctccttctgtt
tcgtggcaggatctgaaagatcacatgcgtcgagctggcgatgtctgtttttcacaagtg
ttccgtgaccgtggtggcatgacgggaattgtagactacacaaactacgaggatatgaaa
tatgctatcagaaaacttgatgactcttacatacgggtgagggagtatgattctaggcgt
agctattccagaagccccagttatgactatagacggagctactctagaagccccagtcgt
actccatatatgtcaagaagtccaagtgtcagccgcagctatagctatggtggccggagc
agaagcatatcaccagaggcaacatactcacgttcccgctcaagatcttggacaagatct
aggtctccaaactcttctcctcgtcccaggactctgagcagaccaaggtcaagatccaga
agcttatctcagtctctttcgccttatgcacggtga
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