Pyrus communis (pear): 137723782
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Entry
137723782 CDS
T10779
Name
(RefSeq) cell division control protein 48 homolog D
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pcox Pyrus communis (pear)
Pathway
pcox04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137723782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137723782
03009 Ribosome biogenesis [BR:
pcox03009
]
137723782
04131 Membrane trafficking [BR:
pcox04131
]
137723782
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcox04147
]
137723782
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
137723782
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
137723782
Membrane trafficking [BR:
pcox04131
]
SNARE
SNARE associated proteins
Others
137723782
Autophagy
Aggrephagy
Other aggrephagy associated proteins
137723782
Exosome [BR:
pcox04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
137723782
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
Mg_chelatase
AAA_17
AAA_28
nSTAND3
Parvo_NS1
AAA_18
ATPase_2
Vps4_C
nSTAND_NTPase5
NB-ARC
ABC_tran
AAA_7
Viral_helicase1
TsaE
IstB_IS21
AAA_lid_PRS2_C
NACHT
DUF815
Zeta_toxin
AAA_24
Zot
Motif
Other DBs
NCBI-GeneID:
137723782
NCBI-ProteinID:
XP_068319073
LinkDB
All DBs
Position
17:9884385..9889200
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AA seq
806 aa
AA seq
DB search
MTDKAESSDSKGTKRDFSTAILERKKAANRLVVDDAINDDNSVVALHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEIGRLEVVRIHTKNMKLAEDVDLEKIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDEEIDAEILNSMAVTNEHFKTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARGSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRFQI
FKSCLRKSPVSKDVDIRALAKYTQGFSGADITEICQRACKYAIRENIEKDIEKERRRNEN
PEAMEEDVEDEIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFAD
NPSGTTAAADPFATAAAAADEDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaggctgaatcttcagactctaagggaacgaagagggacttcagcaccgca
atcctcgagcgcaagaaggcggcgaatcgcctcgttgtggacgacgctatcaacgatgac
aactccgtcgtcgcgctccaccccgatacgatggagaagctccagctctttcgtggcgat
accatcttgattaagggaaagaaaaggaaggataccatctgcattgctcttgctgatgat
acgtgtgaagaacctaagatcaggatgaacaaggttgtgaggagcaatctaagggttagg
cttggggatgttgtttctgttcaccaatgtgctgatgtcaagtacggaaagcgtgtccac
atcctacctgtggatgatactattgaaggggtcactggaaatctgtttgatgcttacttg
aaaccttatttcctggaggcctaccgtccagtgaggaagggtgatctcttccttgtgaga
ggaggaatgaggagtgtggagtttaaggttattgaaactgaccctcctgagtactgtgtg
gtcgctcctgacactgaaattttctgtgagggggagcctgttaaaagggaggatgaggag
agattaaatgaggttggctatgatgatgttggtggagttaggaaacagatggctcagatt
cgtgaattagtggagctgccactgaggcatcctcagctttttaaatcgattggtgtgaag
ccaccgaagggtattttgctctatggacctccaggatcgggtaagactctaattgcccga
gctgtggctaatgaaactggggcattctttttctgcatcaatggaccagaaatcatgtca
aaattggctggggagagtgaaagcaacctcaggaaagcttttgaggaggcagagaagaat
gcgccatcaatcatcttcattgatgagattgattcaattgctcccaagagagagaagacg
catggagaagttgagaggaggattgtttcacagctcttgacactcatggatgggctaaaa
tctcgtgcccatgtgattgttatgggggctacaaatcgtccaaacagtattgatccagct
ctcagaaggtttgggagatttgatagggaaatagatattggtgtgccagatgaaattggg
cgtcttgaggttgtccggattcatacgaagaacatgaagcttgccgaagatgttgatttg
gagaaaatagcgaaggatacacatggttatgttggtgccgatctagctgctttgtgtact
gaggctgcccttcaatgcatcagagagaagatggatgtaattgacttggaagatgaggaa
atagatgctgagatactcaattcaatggcagttacaaacgagcacttcaagactgctctt
ggcacaagcaacccatctgctcttcgtgaaaccgttgttgaagtgcccaatgttagttgg
gaagatattggtggtcttgagaatgttaagcgtgaacttcaagagactgttcagtaccct
gtcgagcatcctgagaagttcgagaaatttggaatgtcaccctctaagggagttcttttc
tatggccctcctggatgtggtaaaactcttctcgccaaagctattgccaatgagtgtcaa
gcaaacttcatcagtgtcaagggacctgaattgcttaccatgtggtttggagagagtgag
gccaatgtgcgggaaatctttgacaaggcccgcggatctgcaccatgtgtcctgttcttt
gatgaacttgactccattgctactcagagaggcagtagcgtaggtgatgctgggggtgct
gctgatagggttttgaaccaactcctcacagaaatggatggaatgactgcaaagaaaacc
gttttcattatcggggccaccaacagacctgatattatagaccctgcacttttgcgtcca
ggtcgtctggatcagttgatttacattcctctccctgacgaggaatcccgatttcaaatt
ttcaagtcttgcttgaggaagtctccagtttccaaagatgtggacatcagagcccttgct
aagtacacccaaggatttagtggtgctgacataacagaaatatgccagcgtgcttgcaaa
tatgccattagagagaatattgagaaggatattgagaaggagaggaggagaaatgagaat
cctgaggcaatggaggaggatgttgaggatgaaattgcagagatcaaggcagctcatttt
gaggagtcgatgaagtatgctcgcaggagtgttagtgatgctgatatccgcaagtaccag
gcatttgcacagacattacagcagtcgagggggtttggaacagagttcaggtttgcagac
aatccttctggcacaactgctgcagccgatccttttgcaactgctgctgctgcggcagat
gaagatgacctttacagttag
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