Pyrus communis (pear): 137723796
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Entry
137723796 CDS
T10779
Name
(RefSeq) transcription factor bHLH140
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03410
Base excision repair
Brite
Enzymes [BR:
pcox01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
137723796
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
137723796
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
137723796
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
137723796
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
137723796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137723796
NCBI-ProteinID:
XP_068319083
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Position
17:complement(16026242..16029700)
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AA seq
755 aa
AA seq
DB search
MDMDIDEKAKGEEKQGKSVAVILVGAPGSGKSTFCEHVMRSSSARPWVRVCQDTIKNGKA
GTKAQCIESAMNALKDGKSVFIDRCNMEKEQRDEFVKLGGSAQVDVHAVVLDLPAKLCIS
RSVKRTGHEGNLQGGRAAVVVNRMLQKKELPKLSEGFARITCCQSESDVQSAVDAYSGLG
PLDTLPSGYFGQKNAGAKVQLGIMRFLKKTDGPANSESTSKSVPDSNASRIIEEKETSSK
GTGSLSENSRKESKEGGELFVGSVGGDVSLNDSPTLAFPSISTADFQFDIEKASDIIVEK
VIEFFNKLGNARLVLVDLSHKSKILSLVRAKASEKNINSNKFFTFVGDITRLHSGGGLHC
NVIANAANWRLKPGGGGVNAAIFSAGGPSLEVATKEQAQSLYPGSAVVVPLPSISPLFSR
EGVTHVIHVVGPNMNPHRPNCLNNDYSKGCKVLREAYTSLFEGFATIVRTQAKSPKGSIE
NLQAKLPKSQEHSDASRNHFTNSDQKTKREDPHKYERSKRSKAYQDDTEDSNTGKPNLSN
KSGGSRTKSWGSWAQALYNTAMHPEKHKDAVLEISDDVVVLNDLYPKAKRHVLVVARCAG
LDRLSDVHKEHLPLLRTMHEVGLKWVEKFFHDDSSLVFRLGYHLDPSMRQLHLHVISQDF
DSTYLKNKKHWNSFNTAFFRDSVDVVEEVSSDGKAKLKEDDSMLSMELRCHRCRSAHPNI
PRLKSHITNCRATFPSTLLQNGRLVHAPSNVSIGP
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atggacatggatatcgacgaaaaagccaaaggggaagaaaagcaaggaaagtccgtcgca
gtaatattggtgggtgcgcccggaagcggaaagtccaccttctgtgagcatgtcatgcgc
tcctcctccgctcgcccctgggttcgagtttgccaggatactataaaaaatggtaaagcc
gggacgaaagcgcagtgtattgagagtgcaatgaatgcattgaaggatgggaagagtgtt
tttatagataggtgtaatatggagaaagaacaaagggatgagtttgtgaagcttggtggt
agtgcccaggttgatgttcatgctgtggtgcttgatcttcctgccaagctttgtatatcg
cggtctgtgaagagaacgggccacgagggaaacttgcaaggtgggagagctgctgtggtt
gtgaatagaatgctgcagaagaaagaactgcccaaactgagtgaagggtttgctagaatc
acttgttgccagagtgagagtgatgttcaatctgctgttgatgcatatagtggacttggt
ccgttggatacacttcccagtggttattttggccagaagaacgccggtgcgaaagtacaa
ctaggtataatgaggttcttaaagaaaacagatggtcctgctaatagtgaatccacttcg
aagagtgtaccagattctaatgcttctcgaattattgaagaaaaggaaacctcttcgaag
ggaacaggttcattgtccgagaattctcgtaaggagtcaaaggaaggtggagagctattt
gtaggctcagttggcggtgatgtttctctaaacgattcccccactctggcatttccctcc
atatcgacagcagattttcaatttgacattgagaaggcgtctgatattattgtcgagaaa
gttatagaattttttaataagcttggaaatgctaggcttgttttagtggacttgagtcat
aaatcaaagattttgtctttggtaagggctaaagcttcagagaaaaacattaactccaac
aagttcttcacatttgtgggagatatcactcggcttcattcaggaggaggtttacactgc
aatgtaatagctaatgctgctaattggcgtcttaaacctggaggtggaggtgtcaatgct
gcaatcttcagtgctggaggtccatctttggaggttgcaaccaaagaacaagcccaatct
ctgtatcctgggagtgctgtggttgtgcctctcccttcaatttcacccttgtttagtagg
gagggggtaacccatgtcatacatgttgttggacccaacatgaacccacacagaccaaat
tgtctgaacaatgactatagtaaaggctgcaaagttctccgggaggcttacacttcactt
ttcgaaggtttcgcaacaattgtgaggacccaagcaaagtcacccaagggaagcattgag
aacctgcaggcaaagctgccaaagtcacaagaacattctgatgcctctagaaatcatttt
acaaacagcgatcaaaagactaagagagaggatcctcacaaatatgagaggagcaaaaga
agtaaagcatatcaggatgatactgaagattctaacactggtaaaccaaacctgagcaac
aagtctggtggaagcaggactaaatcctgggggtcatgggctcaggctctctacaacact
gctatgcacccagagaagcacaaggatgcagtgctagagatatcagatgatgtcgttgtg
ctgaatgatctttatccaaaggcaaaaaggcatgttttggtggtggcacgatgtgcaggt
cttgatcgactgtcagatgttcataaagaacaccttccattgttaaggacaatgcatgaa
gttggtctgaagtgggttgagaaattcttccatgatgattcatctttggtcttccgtctt
ggatatcacttggatccctcaatgcgacagctgcatctgcatgttatcagccaggatttt
gattcaacatacttgaagaataagaaacattggaactccttcaatactgctttctttcga
gactcagtggatgtggtggaggaagtcagtagtgatggaaaagcaaagctaaaagaagac
gatagcatgttgtctatggagttgcgatgccaccgatgtagaagcgctcaccccaacata
ccccgattaaaatctcacataactaactgtcgagccacctttccaagcaccttgctccaa
aatggtcgtcttgttcacgcaccaagcaatgtcagcattggtccgtag
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