Pyrus communis (pear): 137723809
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Entry
137723809 CDS
T10779
Name
(RefSeq) nuclear-pore anchor-like
KO
K09291
nucleoprotein TPR
Organism
pcox Pyrus communis (pear)
Pathway
pcox03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137723809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137723809
NCBI-ProteinID:
XP_068319103
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Position
2:complement(8345829..8364458)
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AA seq
2094 aa
AA seq
DB search
MPLFVSDEDFSRHGNDAVWVADKADAYIRDLYKELETVRAQNDAASITAEQSCSLFEQKY
LSIADEFSKLESEYAQLQSSLDSRLSEVAELQSQKQQLHLQSIGKDGEMERIKAEVLELH
KSKRQLIELVEQKDLEISEKNATIKSYIDRIVLSSDNAAQREARLSEAEAELARTKAACT
RLSQEKELIERHNVWLNDELTEKVNSLVRLRRMHADVEADLSSKLADVERQFNDCSSSLK
WNKQRVRELGDRLTSLQEELHSSKDAAAANEERLTAELSTLNKLVELYKESSEEWSKKAG
DLEGAIKALETHLNQAENDYKERLERAETARNQLEKEAADLKVKLEKCEAEIEASRKSTE
LNLLPLSSFSTEAWMNSFESTDIIEADQAVVPRIPAGVSGTALAASLLRDGWSLAKMYAK
YQEAVDAFRHEQLGRKESEAVLQRVLYELEEKAEVIFDERDEHERMVEAYSMINQKLQNS
ISEQANLEKTIQELKAEVRRHERDYMFARKEIADLQREVTILLKECRDIQLRGTSSGHDS
HDYDTVAVVEMNTESDAERVISEHLLTFKDINGLVDQNVQLRSLVRNLSDQLENREMEFK
ENFEMEIKKHTDEAASRVAAVLQRAEEQGRMIESLHTSVAMYKRLYEEEHKLHSSSPCIE
EAAPEERRTGVKLLFESSQEATRKAQDQTAERVKCLEEDLASTRSEIISLRSERDKLALE
ANFSRERLESFMKEFEHQRNETNGVLARNVEFSQLIVDYQRKLRESSESVQTAEERTRKL
TMEVSVLKHEKEMLEHAEKRACDEVRSLSERVHRLQASLDTIQSAEEIREEARAAERRRQ
EEYTKQIEREWADVKKDLQEERNNACTLTLDREQSVQNAMRQVEEMGKELANALHAVASA
ETRAAVAEAKLTDLNKRIKSSDVKVVDVDGGRGSSSLTSDEALVTLRAAKEEIEKLKEEV
QANKDHMLQYKSIAQVNEDALRQMESAHENFKIEAEKLKKSLEVELISLRERVSELEHEC
SLNSQEVASAAAGKEEALSSTLSEITSLKEETLTKTSQIVSLEIQISALKEDLEKERQRS
RSAQANYERQVILQSETIQELTKTSQDLAMLQEKMSELRKLADVLKGENNELKSKWEFEK
AILEESKNVAEKKYIEINEQNKVLHSQLEALHIQLTERDRGSVGTSASTGPDISGDAGLQ
NVISYLRRTKEIAETEISLLKQEKLRLQSQLESALKASETAQSSLHAERTNSRSLFTEEE
MKSLQLQVREMNLLRESNIQLREENKHNFEECQKFREISQKARAETENLERLLQERQIEL
EACKKEIEMQKTEKEHSEQRVRELLERYRNIDVQDYDRAKDDVCQLQKKLEEKDSEILEV
KKLLSEKMETVSCLERDIANCRLELTEMEKRMSDALQAEASLKSEIEKHRKMATQYKRRL
EMFSREKETVSKEKETLSKEKEELSKENQALSRQLEEVKLVKRASVDTTGVQAIREEKDQ
KIQLLEKHLERQREELRKEKDENRMEKAMRKKMEKAVTDSYNNVDQDKSNFMNELEKHKQ
ALKQLSDELEKLKHAKDSLPQGTSIVQLLSGTILDGLAAAYGLAVENFEKTAHSVHSEFG
AHGVLANTPPVADTSLPATSGTAQAPTVVSSTSPARGLVSKATEERGLASTATEESAKRI
TLPQGNVETRKQGRRLVRPRLVRPEEQQGDVEMSEMEGTRNGGKQAPSNEMEVQGNATLP
QQQLRKRLASSSTFESREESNNQGEICPEVAAPVSKKAKGSDSLQGTEGQPSAISENLGS
VPVKDEPLDVTVDLPQSSNEEAAVDAEKEETETAGEKVEEPNEGQFDGLSQVESQKDSDL
AENVDGSDGKDLPSHDGAKDQVELEQLSSDFGGDREEGELVPDISELEGGDAMGSPEIGE
VQPEPVTTPEASPARGDDYGVAAGSVVDIGEVNSPEVLNDEKNDDIDATEEAADGSDKSI
DGNDHTVTETDQAAEATSVIVDTTSTSTTAEVSVSKQASPSVTAEEVRQVSPVTIPSTTI
NLTTRARENARRRQQARGLSTTPSTGRGGPVGRQTGRSGRGPPGRGRGRGHPRG
NT seq
6285 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcttcgtctccgacgaggacttctcccgccacggcaatgacgccgtctgggtg
gcggacaaggccgacgcctatattcgggacctgtacaaggagcttgagactgtcagggcc
cagaacgacgccgcttccatcacggccgaacagagctgctccctcttcgagcagaagtac
ctttccatcgccgacgaattctccaagctcgagtctgaatacgcgcagcttcagtcctcc
ctcgacagccgcctctccgaggtcgccgagctccagtcgcagaagcagcagctccatctc
caatccattgggaaggatggggagatggagaggattaaggcggaggtgttggaattgcac
aaatcgaagaggcagttgatagagttggtggagcaaaaggacttggagattagtgaaaag
aatgccaccatcaagtcctatatcgacaggattgtactatcttctgacaatgccgctcaa
agggaggcccgtttgagcgaagcggaggcagaattagcacgtaccaaggctgcatgtact
cgtctatcacaggagaaggaacttattgagaggcataatgtctggcttaatgatgagtta
acagagaaagttaacagtctcgttcggctacgtagaatgcatgctgatgttgaggctgat
ttgtcttctaaacttgcagatgttgagagacaattcaatgattgctctagctctttaaaa
tggaacaagcaaagagtgagggaattaggcgacaggctgacgtctttacaggaggagctc
cactcatctaaagatgctgctgcagccaatgaagagcgattaactgctgaactctcaaca
ttaaataagcttgttgaactatacaaagaaagttctgaggaatggtccaaaaaggcagga
gaccttgaaggtgcgatcaaggctctggagacacatttgaatcaagcggaaaatgattac
aaggaaagacttgaaagagcagagactgcaagaaatcaacttgagaaggaagctgcagat
cttaaagtgaaacttgaaaaatgtgaagcagaaatcgaagctagcaggaaatcaactgag
cttaatcttcttccactcagtagttttagtaccgaggcatggatgaattcatttgaatct
accgacattattgaggctgatcaagcggttgtcccaaggattcctgctggtgtttcagga
acagcattagcagcttcacttctgcgggatggctggagtcttgcaaaaatgtatgctaag
taccaagaggccgttgatgcctttcgtcatgagcagttgggaaggaaggaatctgaggca
gtcttgcaacgggttctatatgaattagaggagaaagcggaagtcatttttgatgaaaga
gatgaacatgagagaatggttgaggcatattctatgatcaaccagaaattgcagaactcg
atttctgaacaggcaaacttggagaagaccatccaggagttaaaggctgaggtaaggagg
catgagcgtgactacatgtttgcacgaaaagagattgctgatctccagcgagaggtgaca
atccttctgaaggaatgccgtgatatacagcttcgtgggacatcatctggtcatgatagt
catgactatgatactgttgccgttgttgagatgaacactgaatctgatgccgagagagtg
atatctgaacatctgttgaccttcaaggacataaatggactagttgatcagaatgtgcag
cttaggagcctcgttcggaatctttctgaccagcttgaaaatagggaaatggagttcaag
gagaattttgaaatggagatcaagaagcacactgatgaagctgcctctagagttgcggca
gtgttacaaagagctgaagagcaagggcgcatgattgaatcccttcacacctctgttgca
atgtacaaaaggctatatgaagaggagcataaacttcattcttctagtccttgtatagaa
gaggctgctccagaagaaagaagaactggcgtcaagcttctttttgagagttctcaggaa
gctacaagaaaggcccaagaccagacggcagaacgagtgaaatgtctggaggaagatctg
gcaagtaccaggagtgagatcatatcgttgcggtcagagcgtgacaagttggctttggaa
gcaaatttttctcgagagagacttgagagctttatgaaagaatttgagcatcagagaaat
gaaacaaatggtgttttagcaagaaacgttgagttctctcagttgatagttgactaccaa
cgaaagctgcgtgaaagttctgaatccgttcaaactgctgaggagcgtactaggaagttg
actatggaggtgtctgttttgaagcatgaaaaggaaatgttggaacatgctgagaagcgt
gcttgtgacgaagttcgtagtttgtcggaaagggtccatagactgcaggccagcttggat
actattcagagtgccgaggaaattcgtgaggaggcaagagctgctgagaggagaagacaa
gaagagtatacgaaacaaatagagagggagtgggctgatgtcaagaaagatctacaagaa
gagcgaaacaatgcctgtactctcacacttgaccgtgagcagtccgtacaaaatgctatg
agacaagttgaagaaatgggaaaagagttggctaatgctttgcatgctgttgcatctgct
gagactagagctgctgtagccgaggctaaactgactgatctgaacaaaaggattaagtcc
tctgatgttaaggttgttgatgtcgatggtgggagaggatcttcctccttgactagtgac
gaggctttggtgacattgcgtgctgcaaaggaagagattgaaaagttgaaagaggaagtg
caagctaacaaggatcacatgctacagtataagagcatagctcaggtaaacgaagatgca
ttgaggcagatggaatctgcccatgaaaacttcaagattgaggctgaaaaactaaagaaa
tcgcttgaagtcgaacttatttctctaagagagagagtatctgaacttgaacacgagtgt
agtttgaattctcaagaagttgcttcagcggctgcaggaaaggaagaagctctttcttcc
actctatcagaaattacaagtttaaaggaagaaaccttaactaaaacttcccaaattgtg
tcactggagattcagatatctgctttgaaagaagacttggagaaagaacgtcagcgatcg
cgttctgctcaggccaattatgaaagacaggttatcctccagtcggagacaatacaggag
ttgaccaagacatcgcaagatttggctatgcttcaggaaaaaatgtcagagttacgcaaa
ttggctgatgtactcaagggcgaaaataatgaactcaagtctaagtgggaatttgagaag
gcaatattagaagaatcaaaaaatgttgccgagaagaagtacattgaaatcaacgaacag
aacaaagtactgcacagtcaacttgaggctttgcacattcaactaactgaaagagatcgt
ggttcagttggaacttctgcaagcactggtccagatatttcaggtgatgctggtttacaa
aatgtgataagttatcttcgacggacaaaagaaattgcggagacagagatttccttattg
aaacaagaaaagcttcgattacaatcacaacttgaaagtgctctcaaggcttcagaaaca
gcccagtcatcacttcatgccgagcgcactaattcaagatcattgttcactgaggaggaa
atgaaatccttgcaactacaggttagagaaatgaacttacttcgtgaaagcaatatccaa
ctcagagaagaaaacaagcacaattttgaggaatgccagaaattccgtgaaatatcacaa
aaagctagagccgagactgagaacctagagagattgctacaggagaggcagattgagttg
gaagcctgtaagaaagaaattgaaatgcaaaagacagagaaagaacactcagaacagagg
gttcgtgagttacttgaaaggtatagaaatattgatgttcaagattatgatcgcgcaaag
gatgatgtttgtcagttgcagaaaaaattggaggagaaggattctgaaatactagaagtc
aagaaacttctttcagaaaagatggagactgtatcatgtttggagcgagatattgctaac
tgcagattggaactgactgagatggagaagagaatgagtgatgctttgcaagctgaggca
agtctaaaatcagaaatcgagaagcataggaagatggccactcagtataagaggaggctc
gaaatgttctcaagagaaaaagagaccgtttcaaaagaaaaggagacactgtccaaggaa
aaggaggaactgagcaaggagaatcaagctctttctagacagctggaggaagtcaaatta
gtgaaacgagcatcagtagatactaccggggtgcaagcaattagggaagagaaagaccag
aaaattcagcttctggaaaagcatttggagaggcaaagagaggagctgagaaaggagaag
gatgaaaatcgaatggagaaagcaatgcgcaagaagatggagaaggctgtaacggattcc
tataataatgttgaccaggacaagtcgaacttcatgaatgaactcgagaagcataagcag
gctctgaagcagctttcagatgaacttgaaaagctgaaacatgcaaaagacagtcttcct
cagggtacctcaattgttcaactgctttcgggaaccatactggatggtcttgctgctgcc
tacggtttagctgttgaaaattttgaaaagacagcacattcagttcacagtgagtttgga
gctcacggtgttcttgcaaacactcctccagttgcagatacttcattaccggctacctct
ggtaccgctcaagcacccacggttgtgtcttcaacgagtcctgcaaggggcttagtatcc
aaagcaactgaagagaggggcttagcatccacagccactgaagaaagcgcaaagagaatc
actttaccccaaggcaatgtcgaaacccgtaaacaaggaaggagattggttaggccccgg
cttgtaagacctgaagaacaacaaggtgatgtagagatgtcagagatggaagggacccgc
aatgggggcaaacaagcaccatcaaatgaaatggaagttcaaggcaatgctactttgcca
caacagcagcttcggaaacgtcttgcttcttcatctacttttgagtcccgtgaggaatca
aataaccaaggggaaatttgtcctgaggtggcagcacctgtttcaaagaaggccaaaggt
tcagattctctacaagggactgaagggcagccatctgctatttcagaaaatcttgggagt
gttccagtcaaagatgaacctttagacgtcactgttgatttgccgcaaagttcaaacgag
gaagctgctgttgatgccgagaaagaagaaactgagactgctggggagaaggttgaagag
ccaaatgaaggacagtttgatggtttgagtcaagttgaatcacagaaggatagtgattta
gcggagaatgtggatggatcagatggaaaagatctaccatcgcacgatggagccaaagat
caggttgagctggagcaactgtccagtgattttggaggagaccgagaagagggagagctg
gtccctgatatttctgagcttgaaggtggtgatgcgatgggcagtcctgaaataggggaa
gttcaacctgaacctgtaacaactcccgaggcttccccagctaggggggatgattatggt
gttgctgctggttctgttgtggatatcggtgaggttaattctccagaggttcttaatgat
gagaaaaatgatgacattgatgcaactgaagaagctgctgatggttccgataagtcaatt
gatggtaatgaccatactgtgacggagactgaccaggctgctgaagctacctcagtaatc
gtagataccacttcaacaagtactacagcagaagtaagcgtttcaaaacaagctagtccc
agtgttactgcagaagaggtgagacaggtgtctcctgtgactattccgtcaactaccata
aatttaacaacacgagctcgggagaatgcacgccgaagacaacaggccagagggctttct
actacaccaagcacaggtcgtggaggacctgtcggaagacaaaccggaagatctggacgt
ggacctcctggacgtgggcgtgggcgcggacatcctcgtgggtga
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integrated database retrieval system