Pyrus communis (pear): 137724395
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Entry
137724395 CDS
T10779
Name
(RefSeq) SWI/SNF complex subunit SWI3D-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pcox Pyrus communis (pear)
Pathway
pcox03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137724395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137724395
03036 Chromosome and associated proteins [BR:
pcox03036
]
137724395
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137724395
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137724395
PBAF complex
137724395
GBAF(ncBAF) complex
137724395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
137724395
NCBI-ProteinID:
XP_068319240
LinkDB
All DBs
Position
2:28094171..28099916
Genome browser
AA seq
1008 aa
AA seq
DB search
MEEKRRDAAGTQPPSNADSPTAEPSSTRRRGGAQKRKASTLGGSTSSSTPSKRFAREKAL
LSHTSIHNGPLTRARQGPSSLASASSDGAAAKPAAQAKRPDLVGEAVAELVKRESDLEAL
EASMEAGFESIRSRSANAHVVPSHCGWFSWTKVHSIEEQMLPSFFNGKSVTRTPDVYLKI
RNCIMKKFHANPGTFIELKDLLELEVGEFDARQEVMEFLDHWGLINFHPFPPTGSAVASV
NGDGVAEKDALVDKLYHFKALQSRSSVVPKTNITTPTVLSGLFPESAIAEELVRPEGPAV
EYHCNSCSADCSRKRYHCQKQADFDLCTDCFNNGKFDSGMSSSDFILMEPAEVPGVSSGN
WTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFVQMPIVDTFLDYDDSFDGSAK
ETACPTSTGNDLSVPKGAPEATENKTAVNASDPQTFPIKTSKEVTEVIVGQDTSKPEDLN
EVKDGQETSKLEDTGELRVDQETDENFALKALKEAFEVVGYPPTPEGQLSFTEVGNPAMA
LAAFLARLVGPDAAIASAHNSLKYISASSPGIALAARHCFILKDPPNGRKEHAGPDSVSA
EVEAQKDKVNQDKVHEDKSQKEDNSTSGLEDKDSSNDSSDKKLEKSSSEEKSQSAKEQDG
VVSDEEVGTENLKNSDNLELPRVESPTNVEDTTDSKVETGHQTSSEKESGRAGKPSEPTE
PVNDVDMSDSVPSTKNEIQRPITSNSVEESPQSKEATKDVDVSSSLATEINGPQPVVTTK
SEEPSEPTEVPKDVDMVCDSQTPQKDEPQQPVTSNSVVEKGASDDQTKDGRLEKHDSMET
KVGEKIDKLKLAAVSAVSAAAVKAKLLAEQEEDQIRQLAAMLVEKQLHKLDAKLGFFNEM
EHVVMRVTEQLDRSRQKLYHERAQIIAARLGVPGSSRGMPSIPANRMAMNIANSVPRPTL
GMTSQRPPMSRPMGAAAPTPSNQFSATTLAGSSIWPPRKDKLSSVGSK
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaacgccgcgacgctgccggaactcagccgccgtcaaatgccgactcccca
accgccgagccgtcttctactcggcgtcgtggcggagcccaaaagcgaaaggcaagcacc
cttggcggctcaacctcttcatccacgccatccaaacgtttcgctcgcgagaaagctttg
ctttctcacacttcgatccacaacggcccgttgacccgggcccgtcagggccctagcagc
ctcgcttcggcttcatcagatggggctgctgcgaagccggcggcgcaagccaagcggcct
gacctggtgggggaggcggtggctgagctggtgaaacgggagagcgatttggaggctctg
gaggcttctatggaggctgggtttgaatccattagatctcgcagtgccaatgctcatgtt
gttcctagtcattgcggttggttttcttggacaaaggttcactccattgaggagcaaatg
ttgccgtctttctttaatgggaagtctgtgactcggactcctgacgtatacttgaagata
cgtaattgcatcatgaagaaattccacgcaaatccaggcacatttattgaattaaaggac
ttgttggagcttgaagttggagaatttgatgctagacaagaagtaatggaatttttggac
cactggggtttgattaatttccacccattcccaccaacaggttctgctgtggccagtgtc
aacggtgatggagtggcagaaaaagatgctttggttgataagttgtatcactttaaagca
ttacaatcacgctcatcagttgttcccaagactaatataacgaccccaacagtgctatct
gggttgtttcccgagtctgcaattgctgaagagttggttaggcctgaagggccagctgtt
gagtaccattgcaactcttgttcagctgattgctcacgcaagcgctaccattgccagaag
caggcagattttgatctatgcactgattgctttaataatgggaaattcgactctggcatg
tcttcgtcagatttcattcttatggagcctgctgaagttccgggtgtaagtagtgggaac
tggactgatcaggagactctccttctccttgaagcattagaactttataaagaaaactgg
aatgagattgctgaacatgtcgcaacaaaaacaaaagctcaatgtatactgcactttgtt
caaatgccaattgtggacacttttcttgattatgacgatagttttgatggtagtgctaaa
gagactgcatgtccaacttcaactggaaatgatttatcggtccccaaaggtgcccctgaa
gcaacagagaataagactgctgttaatgcgagtgacccccaaactttcccgattaaaact
tcaaaagaagtgactgaagtaatcgttggacaggatacttcaaagccagaagatttaaat
gaagtcaaagacggtcaggaaacctcaaaattggaagataccggtgaattgagagttgat
caagaaacagatgagaattttgcactaaaggctcttaaagaagcattcgaagttgttggt
tatcctccaacacctgaaggtcaactttcatttacagaagtgggaaaccctgccatggca
ttggcagcattcctagcacgtttggtgggacctgatgctgctattgcttcagcacataat
tctttgaaatatatatctgccagttctcctggtattgcgctggctgcaaggcattgcttt
attttgaaagatccaccgaatggccgtaaggaacatgctggtcctgatagtgtttctgct
gaagtggaagcgcagaaagacaaagtcaatcaagacaaagttcatgaagacaaaagccag
aaagaggataactccacctcaggtttggaagataaagattcatcaaatgatagcagtgac
aagaaacttgaaaaatcttcttctgaagaaaagtcgcaatctgcaaaagaacaagatggt
gtagtttctgatgaggaagtaggaaccgaaaatttgaagaactcggacaacttagagtta
ccaagggtagaatcaccaactaatgtggaggacacaactgattcaaaagtggagacaggg
catcaaacgagttctgagaaggaatcaggacgagcaggaaagccttctgaacctacagag
ccagtaaatgatgtggatatgtctgattcagttccctctacaaaaaatgagattcaacgg
ccaattacatcaaattcagtcgaggaatctcctcaatctaaagaggcaacaaaagatgta
gatgtatctagttctctggctacagaaataaatgggcctcaaccagtggttactaccaaa
tcagaagaaccgtctgaacctacagaggtaccaaaggatgtggatatggtgtgtgattct
cagaccccacagaaggatgagcctcagcaaccagttacatcaaattcagtggttgaaaag
ggagcaagtgatgatcaaactaaagatggtagactagaaaaacatgatagtatggagaca
aaagtgggtgagaaaattgataagctaaagctggctgcagtttctgcagtgtcagcggct
gcagtgaaggcaaagcttctagcagaacaggaagaagatcaaatccgacaacttgcggca
atgttggtggagaagcagttgcataagttggacgccaaattaggattctttaacgagatg
gaacatgttgtaatgagggtaacagagcaattggacaggtcaagacagaagctctaccat
gagcgggcacagataattgcagctcgccttggcgtaccaggttcgtctagaggcatgcca
tcaattcctgccaatagaatggccatgaatattgcaaactcagttccaaggcccacgcta
ggcatgacttcccaaaggccacctatgtcaagaccgatgggggcagcggccccgactccg
tcgaaccaattttcagccacaacattggcaggaagttcaatatggcctcccagaaaggac
aaactttcatcagttgggtccaagtaa
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