KEGG   Pyrus communis (pear): 137725173
Entry
137725173         CDS       T10779                                 
Name
(RefSeq) histone deacetylase 19-like isoform X1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03082  ATP-dependent chromatin remodeling
pcox03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    137725173
   03083 Polycomb repressive complex
    137725173
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pcox03036]
    137725173
Enzymes [BR:pcox01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     137725173
Chromosome and associated proteins [BR:pcox03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     137725173
   HDAC complexes
    Sin3A-HDAC complex
     137725173
    BRAF-HDAC complex
     137725173
    REST complex
     137725173
    SHIP complex
     137725173
    MiDAC complex
     137725173
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     137725173
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    137725173
  Chromatin remodeling factors
   NuRD complex
    137725173
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 137725173
NCBI-ProteinID: XP_068319865
LinkDB
Position
2:complement(14757620..14761519)
AA seq 498 aa
MDTGGNSLVSGADGVKRKVSYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQNMQ
VLKPYPARDRDLCRFHADDYVAFLRNITPETQQDQLRQLKRFNVGEDCPVFDGLYSFCQT
YAGGSVGGAVKLNHGICDISINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLY
VDIDIHHGDGVEEAFYTTDRVMTVSFHKFGDYFPGTGDIRDIGYGKGKYYSLNVPLDDGI
DDESYHYLFKPIIGKVMEIFKPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFN
VPLLLLGGGGYTIRNVARCWCYETGVALGAEIEDKMPQHEYYEYFGPDYTLHVAPSNMEN
KNSHMLLEEIRSKLLENLSSLQHAPSVQFQERPPDTELPEENEEQDDPDERWDPDSDMEV
DDERKPLPSRVKKEIIEPEVKDPIQKGTSENARSSGYDPAVDEITTGAKALDMGSGSVDE
PPTVKVEQDTMNKPADQI
NT seq 1497 nt   +upstreamnt  +downstreamnt
atggacaccggcggcaactctctagtgtcgggtgccgacggagtgaagaggaaggtgagc
tatttctacgacccagaagtgggaaattactattatgggcagggacacccgatgaagccc
caccggattcggatgacccacgccctcctcgcgcactatggcctccttcagaacatgcag
gtcctcaaaccctacccagcccgcgaccgcgacctctgccgcttccacgccgacgattac
gtggcgttcctccggaacatcacccccgaaacgcagcaggaccagctgcggcagctcaag
cggttcaatgtcggcgaggactgccctgtctttgatgggttgtactcgttttgccagacc
tatgctggtgggtcggtcggcggcgctgtgaagctcaaccatgggatttgtgatatttcg
attaattgggccggtggtttgcaccatgctaagaagtgtgaggcttctgggttttgctat
gtgaatgacattgttcttgcaattttggaacttcttaagcagcatgagcgcgttttgtat
gtggacattgatatccaccatggagacggtgttgaggaggcattttacacgacggacagg
gtcatgacggtttcatttcacaagtttggggattattttcctggcacgggggacattcgt
gatattggttacgggaaagggaagtattactcccttaatgttccattggatgacgggatt
gatgatgagagctaccattacttgttcaagcccatcattgggaaggtgatggaaattttt
aagcctggggctgtggttctccagtgtggtgctgattccttatctggggacaggcttggc
tgcttcaatctttccatcaaaggccatgccgagtgtgttagatatatgagatccttcaat
gtcccgctcttgcttctaggtggcggtggctataccattcgcaatgttgctcgttgttgg
tgctacgagacaggagtagcacttggagcagaaattgaggacaaaatgccacagcacgag
tattatgaatatttcggtccagattatactcttcatgttgccccgagtaatatggaaaat
aagaattctcacatgttactagaagaaatacggtcaaagcttcttgaaaacctctccagt
ctgcagcatgcacccagtgtccagtttcaggaaagacctcctgatactgagcttccggag
gagaatgaggaacaggatgacccagacgagaggtgggatccagattctgatatggaggtt
gatgatgaacgtaagcctttaccaagcagagtaaagaaagagatcattgaacctgaagtt
aaagatccgatccagaaagggacctcggagaacgctagaagctcaggctatgatccagca
gtagatgagataacaacaggcgcaaaggctttggatatgggatctggatcagtggatgaa
ccaccaactgtgaaagttgaacaagacactatgaataagcctgcggaccagatataa

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