KEGG   Pyrus communis (pear): 137725255
Entry
137725255         CDS       T10779                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03020  RNA polymerase
pcox03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    137725255
  09124 Replication and repair
   03420 Nucleotide excision repair
    137725255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pcox03021]
    137725255
   03400 DNA repair and recombination proteins [BR:pcox03400]
    137725255
Enzymes [BR:pcox01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     137725255
Transcription machinery [BR:pcox03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     137725255
DNA repair and recombination proteins [BR:pcox03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      137725255
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_3 RNA_pol_Rpb2_4 RNA_pol_Rpb2_5 MRNIP
Other DBs
NCBI-GeneID: 137725255
NCBI-ProteinID: XP_068319985
LinkDB
Position
2:complement(2884536..2891468)
AA seq 1193 aa
MEEEHEYDDQQYMDDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESADIEIRPESQHNPGHQPDFAETVCKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVSKRMIKKGHDGEELTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS
TMFVRMLARTSSKGGSSGQYIKATLPYIKGEIPIIIVFRALGFVADKDILEHICYDFSDT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGANVGVSRDKRIKYAKEILQKEMLPHVGVGE
FCETKKAYYFGYIVHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRNLFRKLTKDV
RAYAQKCVDNGKDLNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVRTLRKLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDAGWHDL
VAKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAISCYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPMAQDEAPGQTTSRYTRRDHS
ISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
MPWTVEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
LHSCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS
FECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLTKDIKPAKNQKKKGG
NT seq 3582 nt   +upstreamnt  +downstreamnt
atggaggaggagcacgagtacgacgatcagcagtacatggacgacgacgatgaagatgaa
atcacgcaggaggacgcgtgggccgtcatctccgcctacttcgaggagaagggcttggtg
cgccagcagctcgactcgttcgacgaattcattcagaacacaatgcaggagattgtcgac
gagtcggccgatatcgagattcggcccgagtcgcagcacaacccggggcaccagcccgat
ttcgccgagactgtatgcaagattagctttggtcagatttatttgagtaagcccatgatg
accgaatccgatggagaaactgcaaccttatttcccaaagctgcaagacttagaaatctg
acgtactcagcacccttgtatgttgatgtctcaaagaggatgataaagaaaggacatgat
ggcgaagaactcactgagacccaggatttcaccaaagtattcattgggaaggttcctata
atgcttcggtctagttattgcacgctgtaccagaattcagagaaagatttaactgagctg
ggagagtgtccatatgatcaaggtggatattttattataaatgggagtgaaaaggttctt
attgctcaagagaagatgagcaccaatcacgtctatgtgttcaagaagaggcagcctaac
aagtatgcctatgtggctgaagttaggtctatggcggagtctcaaaacaggccacccagt
accatgtttgttcggatgcttgctcggactagttctaaagggggttcttcgggacagtac
atcaaagctacccttccatatattaaaggtgaaattcctattattattgtgttccgggct
ctcgggtttgttgcggataaagacatcctagagcacatatgttatgacttctctgatact
caaatgatggagctgcttagaccttctctggaagaagcatttgtgattcagaatcaacag
gttgcattagattatattggaaagagaggtgcaaatgttggtgtaagtagagacaagaga
atcaagtatgcgaaagagattctgcaaaaggaaatgcttccacacgttggtgttggagaa
ttttgtgagacaaagaaagcttactattttggatatatcgtccacaggcttctactatgt
gcactaggacgaaggccagaagatgacagggatcattatggcaacaagaggcttgatctt
gctggtcccttactcggaggcttgtttcgaaatctattcaggaagttgaccaaggatgtg
agagcttatgcacagaagtgtgttgacaatggaaaggatcttaatctgcaatttgccatc
aaagctaaaaccattacgagtggccttaaatattcacttgccactggaaactgggggcaa
gcaaatgcagctggtacaagggctggagtgtcgcaggtgttaaatcgtttgacatacgca
tccaccctctcacacttgagaagactgaattctccaatagggcgtgaagggaaattggct
aaaccgcgtcagctgcataattcgcaatggggaatgatgtgcccagctgaaacacctgaa
gggcaagcgtgcgggcttgtaaagaatcttgcattgatggtatacataaccgtaggatca
gctgcatatccaatcttggaatttttggaagaatggggtacagaaaactttgaggaaatt
tctcctgcggttataccccaagctacaaaaatttttgttaacggctgttgggttggaatc
catcgtgatcctgaaatgttggtgaggacattgagaaagctaaggcgacgggttgatgtc
aacactgaagttggggttgtgagagatatccgtctgaaagaattgcggatatatactgac
tatggacgttgcagtcgtccattattcattgtggacaaacagaggcttctcataaagaag
aaagatattcatgcattgcagcagagggaaagccctgaagatgctggttggcatgacctt
gtagcaaagggatatattgaatatattgacactgaagaagaggagacgacaatgatttcc
atgacaattaatgatcttgtccaagcaagactcaatcctgaggaggcatattcggacact
tatactcattgtgaaatccacccatcacttattttgggtgtttgtgcttctattataccg
tttcccgatcataatcagtctccacgtaatacatatcaatctgctatgggaaagcaagct
atggggatttatgtcaccaattatcagttccgaatggatacattggcatatgttttatac
taccctcagaaacctcttgtcaccacaagagccatggagcatctccacttcaggcagctt
cctgctggcatcaatgctattgttgccatctcctgttattctggttataaccaggaagat
tctgtcattatgaatcaatcctctgtggaccgtggattcttccggtcactattcttccga
tcctatagggatgaggagaaaaagatggggacccttgtcaaagaagattttgggcgtcct
gacagagcaaatactatgggtatgcgacatggttcttatgacaaattggatgatgatggt
cttgctcctcctggaactagggtttcaggtgaggatgtcatcataggaaagactacaccc
atggctcaggatgaggctccagggcaaactacatcgcgttacacacggcgtgaccacagc
ataagtttgcgccacagtgaaaccggcatagttgatcaggttctactgacgaccaatgct
gatgggttgcggtttgttaaagtacgggtgaggtctgtcagaatacctcaaattggtgat
aaatttagtagcaggcatggacagaaggggacggtgggtatgacttatacccaggaagac
atgccatggactgtggaaggggtgacccccgatataatcgtgaacccgcatgctattcct
tctcggatgacaattggtcagctcattgagtgtattatggggaaggttgcagctcatatg
ggaaaggaaggagatgctacaccttttacagatgtcacggtggacaatatcagtaaagct
cttcacagttgtgggtatcaaatgcgtggattcgagaccatgtataacggtcacacgggc
aggcggctcagtgctatgatattccttggccccacatactaccagagactgaagcatatg
gtcgacgataagatccattcacgtggacggggtccagtgcagatcctcacaaggcagcca
gctgagggacgatctcgtgatggtggtctacgcttcggggaaatggaacgagattgcatg
attgcccatggtgctgctcactttctgaaagaaagattgtttgaccagagtgatgcatat
agggttcatgtctgtgagcgttgtgggttaatagctattgcaaatctcaagaagaattcg
tttgagtgcaggggttgcaagaataaaaccgacattgttcaggtttacattccttatgcc
tgcaagctgcttttccaagagctaatgtcgatggccatagcgccaagaatgctcacaaag
gacatcaagcctgccaaaaaccaaaagaagaaaggaggctga

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