Pyrus communis (pear): 137725255
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Entry
137725255 CDS
T10779
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03020
RNA polymerase
pcox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137725255
09124 Replication and repair
03420 Nucleotide excision repair
137725255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137725255
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137725255
Enzymes [BR:
pcox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137725255
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
137725255
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
137725255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
137725255
NCBI-ProteinID:
XP_068319985
LinkDB
All DBs
Position
2:complement(2884536..2891468)
Genome browser
AA seq
1193 aa
AA seq
DB search
MEEEHEYDDQQYMDDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESADIEIRPESQHNPGHQPDFAETVCKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVSKRMIKKGHDGEELTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS
TMFVRMLARTSSKGGSSGQYIKATLPYIKGEIPIIIVFRALGFVADKDILEHICYDFSDT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGANVGVSRDKRIKYAKEILQKEMLPHVGVGE
FCETKKAYYFGYIVHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRNLFRKLTKDV
RAYAQKCVDNGKDLNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVRTLRKLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIHALQQRESPEDAGWHDL
VAKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAISCYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPMAQDEAPGQTTSRYTRRDHS
ISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
MPWTVEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
LHSCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS
FECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLTKDIKPAKNQKKKGG
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagcacgagtacgacgatcagcagtacatggacgacgacgatgaagatgaa
atcacgcaggaggacgcgtgggccgtcatctccgcctacttcgaggagaagggcttggtg
cgccagcagctcgactcgttcgacgaattcattcagaacacaatgcaggagattgtcgac
gagtcggccgatatcgagattcggcccgagtcgcagcacaacccggggcaccagcccgat
ttcgccgagactgtatgcaagattagctttggtcagatttatttgagtaagcccatgatg
accgaatccgatggagaaactgcaaccttatttcccaaagctgcaagacttagaaatctg
acgtactcagcacccttgtatgttgatgtctcaaagaggatgataaagaaaggacatgat
ggcgaagaactcactgagacccaggatttcaccaaagtattcattgggaaggttcctata
atgcttcggtctagttattgcacgctgtaccagaattcagagaaagatttaactgagctg
ggagagtgtccatatgatcaaggtggatattttattataaatgggagtgaaaaggttctt
attgctcaagagaagatgagcaccaatcacgtctatgtgttcaagaagaggcagcctaac
aagtatgcctatgtggctgaagttaggtctatggcggagtctcaaaacaggccacccagt
accatgtttgttcggatgcttgctcggactagttctaaagggggttcttcgggacagtac
atcaaagctacccttccatatattaaaggtgaaattcctattattattgtgttccgggct
ctcgggtttgttgcggataaagacatcctagagcacatatgttatgacttctctgatact
caaatgatggagctgcttagaccttctctggaagaagcatttgtgattcagaatcaacag
gttgcattagattatattggaaagagaggtgcaaatgttggtgtaagtagagacaagaga
atcaagtatgcgaaagagattctgcaaaaggaaatgcttccacacgttggtgttggagaa
ttttgtgagacaaagaaagcttactattttggatatatcgtccacaggcttctactatgt
gcactaggacgaaggccagaagatgacagggatcattatggcaacaagaggcttgatctt
gctggtcccttactcggaggcttgtttcgaaatctattcaggaagttgaccaaggatgtg
agagcttatgcacagaagtgtgttgacaatggaaaggatcttaatctgcaatttgccatc
aaagctaaaaccattacgagtggccttaaatattcacttgccactggaaactgggggcaa
gcaaatgcagctggtacaagggctggagtgtcgcaggtgttaaatcgtttgacatacgca
tccaccctctcacacttgagaagactgaattctccaatagggcgtgaagggaaattggct
aaaccgcgtcagctgcataattcgcaatggggaatgatgtgcccagctgaaacacctgaa
gggcaagcgtgcgggcttgtaaagaatcttgcattgatggtatacataaccgtaggatca
gctgcatatccaatcttggaatttttggaagaatggggtacagaaaactttgaggaaatt
tctcctgcggttataccccaagctacaaaaatttttgttaacggctgttgggttggaatc
catcgtgatcctgaaatgttggtgaggacattgagaaagctaaggcgacgggttgatgtc
aacactgaagttggggttgtgagagatatccgtctgaaagaattgcggatatatactgac
tatggacgttgcagtcgtccattattcattgtggacaaacagaggcttctcataaagaag
aaagatattcatgcattgcagcagagggaaagccctgaagatgctggttggcatgacctt
gtagcaaagggatatattgaatatattgacactgaagaagaggagacgacaatgatttcc
atgacaattaatgatcttgtccaagcaagactcaatcctgaggaggcatattcggacact
tatactcattgtgaaatccacccatcacttattttgggtgtttgtgcttctattataccg
tttcccgatcataatcagtctccacgtaatacatatcaatctgctatgggaaagcaagct
atggggatttatgtcaccaattatcagttccgaatggatacattggcatatgttttatac
taccctcagaaacctcttgtcaccacaagagccatggagcatctccacttcaggcagctt
cctgctggcatcaatgctattgttgccatctcctgttattctggttataaccaggaagat
tctgtcattatgaatcaatcctctgtggaccgtggattcttccggtcactattcttccga
tcctatagggatgaggagaaaaagatggggacccttgtcaaagaagattttgggcgtcct
gacagagcaaatactatgggtatgcgacatggttcttatgacaaattggatgatgatggt
cttgctcctcctggaactagggtttcaggtgaggatgtcatcataggaaagactacaccc
atggctcaggatgaggctccagggcaaactacatcgcgttacacacggcgtgaccacagc
ataagtttgcgccacagtgaaaccggcatagttgatcaggttctactgacgaccaatgct
gatgggttgcggtttgttaaagtacgggtgaggtctgtcagaatacctcaaattggtgat
aaatttagtagcaggcatggacagaaggggacggtgggtatgacttatacccaggaagac
atgccatggactgtggaaggggtgacccccgatataatcgtgaacccgcatgctattcct
tctcggatgacaattggtcagctcattgagtgtattatggggaaggttgcagctcatatg
ggaaaggaaggagatgctacaccttttacagatgtcacggtggacaatatcagtaaagct
cttcacagttgtgggtatcaaatgcgtggattcgagaccatgtataacggtcacacgggc
aggcggctcagtgctatgatattccttggccccacatactaccagagactgaagcatatg
gtcgacgataagatccattcacgtggacggggtccagtgcagatcctcacaaggcagcca
gctgagggacgatctcgtgatggtggtctacgcttcggggaaatggaacgagattgcatg
attgcccatggtgctgctcactttctgaaagaaagattgtttgaccagagtgatgcatat
agggttcatgtctgtgagcgttgtgggttaatagctattgcaaatctcaagaagaattcg
tttgagtgcaggggttgcaagaataaaaccgacattgttcaggtttacattccttatgcc
tgcaagctgcttttccaagagctaatgtcgatggccatagcgccaagaatgctcacaaag
gacatcaagcctgccaaaaaccaaaagaagaaaggaggctga
DBGET
integrated database retrieval system
