Pyrus communis (pear): 137725330
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Entry
137725330 CDS
T10779
Name
(RefSeq) protein CHROMATIN REMODELING 8-like
KO
K10841
DNA excision repair protein ERCC-6
Organism
pcox Pyrus communis (pear)
Pathway
pcox03420
Nucleotide excision repair
Brite
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
137725330
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
137725330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137725330
NCBI-ProteinID:
XP_068320077
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Position
2:complement(11392530..11397833)
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AA seq
1208 aa
AA seq
DB search
MEEDEDAILLNSLKGATAANPEDIERDILSGVHNNGNGNNVGEVGGSNEEEERLEKSDSI
DPSVASGVKLYNKLRAVEFEIDAVESTVEPEQAGSEEGDRDGGDGAEAGNKEDNLQHALA
TDRLRSLKKTKAQLEKELSDLGKGRPSKGIAHDKVLLDIVKDKPAPKRKSKQVQISGKKL
KKRIKTVSFDEDDDFDAVLDAASAGFVETERDELVRKGILTPFHKLKGFERGLQEQGPSR
GRNVPAEGGRSDDFVSASVARAVRSLSEAAQARPATKLLDPEALPKLDPPTHPFKRLRKP
LKIPQSLENGTQRTKSSGKKRKRPLPDKRWRKRISLEENNLLESENTPGCEEENKDDVGD
VDDDEYPHVTLEGGLKIPEYIFNELFDYQKVGVQWLWELHCQRAGGIIGDEMGLGKTIQV
LSFLGALHFSHIYKPSIIVCPVTLLRQWKREAKKWYPSFHVELLHDSAREPAIKNKGSKS
DESDSDSEGSSDSDYERPESSKSTKKWDSLINRVLRSESGLLITTYEQLRIVGESLLDVD
WGYAVLDEGHRIRNPNAEVTLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGV
LPIFEAEFAVPISVGGYANASPLQVSTAYRCAVVLRDLIMPYLLRRMKADVDAQLPKKTE
HVIFCSLTDEQRSAYRAFLASSEVEQIMDGNRNSLYGIDVMRKICNHPDLLEREHCGQNP
DYGNLERSGKLKVVSQVLKVWKDQGHRVLLFTQTQQMLDIIESFLVADDYSYRRMDGLTP
IKQRMALIDEFNNSSDVFVFILTTKVGGLGTNLTGANRVIIFDPDWNPSTDIQARERAWR
IGQKRDVTIYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRIFKARDMKDLFTLSDD
RENGSTETANLFGQLSEDANVVGVQNDKPDKQDSQRGSVRSTNGVVADKANNSEAGPSRR
NGKEKADQSDGEVDEETNILRCLFDAQGIHSAMNHDVIMNAHDEEKMKLDEQASRVAQRA
AEALRQSRMVRSRDGVSVPTWTGKSGMAGAPSAVRGKFGSTLNSQLVKNTKRSDEGPSNG
TNGFVAGAPAGKALSSAELLAKIRGNQERAVEAGIEHQFNRAKSLDVGPSRTGHNLGGVQ
PEVVIRQICTFIQQRGGSTDSSSIVQHFKDRIPSKDLPLFKNLLKEIAKLEKNQNGAVWV
LKPEFDRQ
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagacgaagatgcaattttgctcaacagtttgaaaggggcgacggcggcgaat
cccgaggatatcgagagggacattttatcaggggtacataacaatggcaatggtaataat
gttggtgaagttggagggagtaatgaggaggaggaacgccttgagaaatccgatagtatt
gatccatcggttgccagtggggtcaaattgtataacaaattgagggcagttgagtttgaa
attgatgccgttgagtccactgttgaaccagaacaagcggggagtgaagagggtgatcgt
gatggtggtgatggcgcagaggcgggaaataaggaagataacctccagcatgccctggct
actgaccggttaagaagtctaaagaaaacaaaggcgcaacttgagaaggagctttcggat
ttaggcaagggaagaccgtccaagggtattgcgcatgacaaagtcttattggatattgtc
aaggacaagcctgcacccaagaggaagtcgaaacaagttcagatatccggaaaaaagcta
aagaaaaggatcaaaacggtctcatttgatgaggatgatgactttgatgctgtgttggat
gcagcatctgcaggctttgttgaaacagaaagggatgaattagttcggaaaggaatttta
actcctttccataagctaaagggctttgagcgcggccttcaagaacaagggccatctcgg
gggcgtaatgttcccgcagaaggaggcaggagtgatgattttgtttcagccagtgttgct
agagcagttcggtcactttcagaggctgctcaagctcgcccagctaccaagttgcttgat
ccagaagctctaccaaagcttgatccacccactcatccttttaagaggctaaggaaaccg
cttaaaattcctcaatccctagaaaatggtacacagaggactaaaagttcaggaaagaaa
aggaagcgtcctttgccggacaaaagatggagaaagcgcatttctcttgaggaaaataat
ttgcttgaaagtgaaaacactcccggctgtgaagaagaaaacaaagatgatgttggagat
gtagatgatgatgagtatccacatgttaccctagaaggggggctgaaaattccggagtac
atttttaacgaactctttgactatcaaaaggtaggggtccagtggctatgggaactgcat
tgccaaagagcaggcggaattattggagatgagatgggtcttggtaaaaccatccaggtt
ctgtcgttcctcggcgcattgcatttcagtcatatttataaaccaagcattattgtctgc
ccagttactcttttgcgccaatggaaaagggaggctaaaaaatggtacccgagctttcat
gtggagctacttcatgattcagctcgggagcctgccattaaaaataaaggatcaaagtct
gatgaaagtgattctgatagtgaaggttcatcggacagtgattatgagagaccagaatca
tctaaaagcaccaaaaaatgggattccttgatcaaccgtgttttgaggtcggaatctggg
ttgctaattacaacttatgagcaactccgtattgtaggggaaagtttgcttgacgttgat
tggggttatgcagttctggacgaaggacaccgaatcaggaacccaaatgcagaagttact
ctagtttgtaagcagttacaaacagtacatcgtattataatgacgggtgcaccaattcag
aacaagctgactgaactgtggtccttgtttgattttgttttccctggaaagttgggggtg
ttgcccatatttgaggctgagtttgcagttcccatatctgttggtggctatgcgaatgct
tcaccattacaagtatccactgcatacaggtgtgctgtggttttgcgagacttgatcatg
ccgtatctcctccggcgcatgaaggctgatgtggatgcgcagcttcctaagaagactgaa
catgtcatcttttgcagcctcactgatgagcaacgatctgcatatagagcatttcttgct
agttctgaggtggaacagattatggatggtaataggaattcactttatggaattgatgtg
atgcgcaagatctgcaaccaccctgatctgcttgagagggaacactgcggccagaatcca
gattatgggaatctagaacgcagtgggaaattaaaagttgtttcacaagtgcttaaggtt
tggaaggatcaagggcatcgtgttcttctttttacacaaactcagcaaatgcttgacatt
attgaaagttttctggttgctgatgattatagttaccggaggatggatggtcttactccc
atcaaacagaggatggccttaatagatgaatttaacaactcaagtgatgtgtttgttttc
attttaacaactaaagtgggtggtttaggaacaaatctgacaggtgcaaacagggtgatc
atctttgatcccgactggaacccttcaactgacatccaggcaagagagcgggcttggcgt
attggtcaaaagcgggatgtaaccatatatagattgatcacccgcggaaccatagaggag
aaggtatatcatagacaaatttacaagcatttcctgaccaataagatattgaagaaccca
caacagagaaggatctttaaagctagagacatgaaggatcttttcactctgagtgatgac
agagagaatgggtctactgaaacagctaatctgttcggtcaattatctgaagatgccaac
gtcgttggtgtgcagaatgataaacccgataagcaagattctcagagaggttctgtacgg
tctaccaatggtgttgtggctgacaaggcaaataactcagaggctggaccatccaggagg
aatgggaaagaaaaggctgaccagagtgacggtgaagtagatgaagagacaaatattttg
aggtgcctttttgacgcccaagggatacatagtgctatgaaccatgatgtaatcatgaat
gcccatgatgaagagaagatgaagcttgacgagcaagcttcccgagttgcacaaagagca
gcagaagcgttgcgccagtcacggatggttcgaagccgtgatggcgtgtctgtccccaca
tggactgggaaatcaggaatggcaggtgcaccatcagctgtccgtgggaaattcgggtct
actctgaactcccagttggtcaagaataccaaacggtcagatgaaggccccagcaacggc
acaaatggtttcgtggctggggctcctgctgggaaggcactatcttctgctgaattactg
gcaaaaattagaggaaaccaagaaagagctgtggaagccggaattgagcatcagtttaac
cgagcaaaatcccttgatgttggaccttctaggacgggtcacaacttaggcggagtgcaa
cctgaagtagtgattcgtcagatctgtacattcatccaacaaagaggcggaagtacggat
tcttcaagcatagtgcagcattttaaggacagaataccatctaaagatcttcccttgttt
aagaatcttttgaaggaaatagccaaactggagaaaaaccaaaacggagcagtttgggtt
ctaaagccagagtttgatcgtcagtaa
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integrated database retrieval system
