Pyrus communis (pear): 137725367
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Entry
137725367 CDS
T10779
Name
(RefSeq) probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
pcox Pyrus communis (pear)
Brite
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137725367
Spliceosome [BR:
pcox03041
]
Complex C
Other components
Complex C specific factors
137725367
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GFIT
Other DBs
NCBI-GeneID:
137725367
NCBI-ProteinID:
XP_068320127
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Position
2:3480080..3487133
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AA seq
690 aa
AA seq
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MSQFWKPGAEKPRLIDDEEGGVLFFNSPSGYANIERQRQRLPVFRYRTAILYLVETHATT
IVVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVAARVAEEMGVKLGEEVG
YTIRFEDVTTQGVTMIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSIATDILLGLLK
KIQRRRPELRLIISSATIQAKSMSEFFQPRKSRRRPDGEDLAPNMEPAVLSVEGRGFNVQ
IHYVEEPVSDYLRAAVSTVLLIHDQEPMGDILVFLTGQDDIDAAVQLITEEAQNRGNNSS
GLMLVPLYSGLPRAEQELVFTPTPRGKRKVVISTNIAETSITLEGVVYVVDSGFSKQRFY
NPITDIENLVVAPISKASARQRTGRAGRVRPGKCYRLYTEEYFAKEMSDEGIPEIQRSNL
VSCVIQLKALGIDNILGFDWPASPSSEAMVRALEVLYSLGVLDDDAKLTSPTGFQIAEFP
LEPMIAKMILSSGELGCSEEIITIAAVLSIQTIWVSGRGSQKELDEAKLNFAAAEGDHVS
FLNVYKGFLQSSKSPQWCHKNFVNYQAMKKVIEIRGQLRRTAQRLGIVLKSCERDTVVVR
KAITSGFFANASRLDASSHDGKYKTIRGSQEVYIHPSSVLFRVNPKWVLYHSLVSTDKQY
MRNVISIDPSWLTEAAPHFYQHQRLNSMVR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagttctggaaaccaggggccgagaagccccgcctcatcgacgacgaagagggc
ggtgtccttttcttcaattccccttctgggtacgcgaacattgagcggcagaggcaaagg
ctgcccgtgttccggtaccgcaccgccattctttacctggtggagactcacgccactacc
atcgtagtcggcgaaacgggcagcggcaaaaccacccaaattcctcagtacctcaaagaa
gccggttgggctgacggagggcgggttatagcgtgcacccagccaaggaggctggctgtc
caggcagttgctgcaagggtcgcggaagaaatgggggtcaagcttggggaggaagttggc
tacactataagatttgaagatgttacaacacagggtgtaactatgataaagtttttgact
gatggtgtgctactcagggaaatgatggatgatcctcttttgactaaatatagcgtcata
atggttgatgaggctcatgaaaggtctatcgcaactgacattttattgggtctcctgaaa
aagatccaacgacgccgacctgagctgcgtctgattatctcatctgccacaattcaagca
aagtcgatgtctgaattctttcagcccagaaaaagtcgtcgcagaccagacggagaggat
cttgcaccaaatatggagcctgcagtcctatcagttgagggtagagggtttaatgtacaa
attcattatgtggaggagcctgtatctgactatcttcgggctgctgtgtcaactgtgtta
ttgatccatgaccaggaaccaatgggagatattctggtttttcttactggtcaagatgat
attgatgctgctgtacagctgattactgaagaagctcaaaaccgcggaaataactcatca
ggattgatgcttgtgccgctctactcaggacttccacgtgctgagcaggagctggtgttc
actcctactcccagagggaagaggaaagtagtgatatcaaccaatatagcagagacgtca
ataactttggagggcgttgtctatgttgttgacagtgggttctcgaagcagcgtttctac
aacccgataacagatattgaaaatctggtagtggcaccaatatccaaggcatctgctaga
caaagaactggtagggctggaagagttcggcctgggaaatgttacaggctatatacggaa
gagtattttgcaaaggaaatgtctgatgaggggattccagagatacagaggtcaaatctt
gtgtcctgtgtgattcagttaaaagccttgggaatagataatatcctgggttttgattgg
ccagcatctccttcttccgaagcaatggttcgagcgcttgaagtgctttattcacttgga
gtcctagatgatgatgcaaaacttacttcgccaactggatttcaaattgctgagtttcca
ttggaaccaatgattgcaaaaatgatattatcttcaggtgaactggggtgttcagaagag
ataattaccattgctgccgttctctccattcaaactatctgggtttcgggtaggggatcg
cagaaggaactggatgaagccaagttgaattttgcggctgctgagggcgaccacgtgagt
ttcctaaatgtctacaaaggatttcttcagtctagtaaatcgccgcagtggtgccataag
aactttgtaaactaccaagccatgaaaaaggttattgaaattagaggacaactcagaaga
acggctcagagattaggcattgtcttgaaatcttgtgaaagagacacagtggtagtgagg
aaggccattactagtgggtttttcgctaatgcaagtcgattagatgcatcaagtcacgac
gggaagtacaagactattagaggttctcaagaagtttatattcacccatcatccgtgtta
ttcagagttaatcccaagtgggttctgtaccattctcttgtctcaaccgacaagcagtac
atgcggaatgtgatttcgatagatccttcttggctcacagaggcagctccacatttttac
cagcaccagcgactcaactcgatggttcgctaa
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