Pyrus communis (pear): 137725421
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Entry
137725421 CDS
T10779
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
pcox Pyrus communis (pear)
Pathway
pcox03020
RNA polymerase
pcox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137725421
09124 Replication and repair
03420 Nucleotide excision repair
137725421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137725421
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137725421
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
137725421
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
137725421
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Pro_Al_protease
Motif
Other DBs
NCBI-GeneID:
137725421
NCBI-ProteinID:
XP_068320192
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All DBs
Position
2:20783656..20787241
Genome browser
AA seq
318 aa
AA seq
DB search
MEGKSYQRLPRVKIREMRDDYLKFELRDTDASVANALRRVMIAEVPTVAIDLVEIEINSS
VLNDEFIAHRLGLIPLTSDRAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLDV
TSKDLLSSDHTVVPVDFSDSSGLESSEQKGIIIVKLRRGQELRLRAIARKGIGKDHAKWS
PAATVTFMYEPDIRINEELMDTLTLEEKKAWVDSSPTKVFDIDPKTDKVVVVDPEAYTYD
DEVIKKAEAMGKSGLVDISAREDSFIFTVESTGAIKAAQLLLNAIEVLKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaaatcgtaccagaggctcccgcgcgtcaaaatccgcgaaatgcgtgacgac
tacttgaagtttgagctccgcgatactgacgccagcgtcgccaacgcgctccggcgcgtc
atgatcgccgaggtccccaccgtcgccatcgacctcgtcgagatcgagattaactcctcc
gtcctcaacgacgagttcatcgcccaccgacttggcctcatccccctcacctccgaccgc
gccatgagcatgcgtttctcacgtgactgcgacgcctgcgacggcgacggccagtgcgag
ttctgctccgtcgagttccatctccgcgccaagtgccactccgaccaaaccctagatgtc
accagcaaggacctcctcagctccgaccacaccgtcgtccccgttgatttctctgattcc
tccggcttggaatcgtccgaacaaaagggaattatcattgtgaagttgcgaagggggcag
gaactgaggctgagggccattgccagaaaggggattggcaaagatcatgctaagtggtca
ccggcggccactgtcactttcatgtatgaacccgacattcgaatcaatgaggagctgatg
gatactttgactcttgaggagaagaaggcttgggttgatagtagtcctaccaaagtcttt
gacattgatcctaaaaccgacaaggtcgtggttgttgatcctgaagcatacacctatgac
gatgaagtgatcaagaaagcagaagctatggggaagtctgggcttgtggatatcagtgca
agggaagatagctttatattcacagtggaatctaccggtgcgattaaagctgcacagcta
ctcctcaatgccatagaagtcctgaaacagaagctggacgcagtgcgcctttctgaggat
actgtagaagccgatgaccagtttggggaattaggtgcacatatgcgaggaggatga
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