Pyrus communis (pear): 137725680
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Entry
137725680 CDS
T10779
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB2-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
pcox Pyrus communis (pear)
Pathway
pcox03022
Basal transcription factors
pcox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137725680
09124 Replication and repair
03420 Nucleotide excision repair
137725680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137725680
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137725680
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
137725680
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
137725680
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
137725680
NCBI-ProteinID:
XP_068320551
LinkDB
All DBs
Position
2:complement(2828946..2834430)
Genome browser
AA seq
454 aa
AA seq
DB search
MPQVRIIAKNFMDMVAALPAMKLDKLYENAFICEAILRSLPPLAKKYVLQLLCIEVPVTA
KSMDEWVLPDGVSKHRVAIDRLIQLRIFTETVDRKRETTYTLNPIFQTNLKKLLVHGVVL
PREPMPSNITVRLPSLEDLQAFALEQWECFLLQLINSSQSERPSNISSSMMKTFQRGLLS
QRDREAPRLTESGFQFLLMDTNAQLWYIIREYISNSEERGLDSADLISFLLELSFHVTGE
AYNINTLNERQKNIIKDLADLGLIKLQQGRKDSWFIPTELATNLSVSLTDSSSRKQGFVV
VETNFRLYAYSTSKLHCEILRLFSRVEYQLPNLIVGAITKESLYSAFENGITGEQIISFL
QQNAHPRVAERVPSVPENVTDQIRLWETDLNRVEMTPAYYYDEFPTRELLEGASDFARGY
NALLWEDVNSKKMRLVVKAENHVHMREYLGRQRQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaggtgaggatcatcgcgaagaatttcatggacatggtggccgccctgcccgcc
atgaagctcgacaagctatacgagaatgcattcatctgcgaagcaattctcaggtctctg
ccaccgttggctaagaaatatgtcttgcaactgttgtgcattgaagttccggtgactgcc
aagtcaatggacgagtgggtgcttcctgatggggtctcgaaacatagagttgcaattgat
cggctgattcaattgagaatatttactgaaactgtggacaggaagagggaaacaacttac
acactaaatcctatatttcagacaaatctcaagaagcttctggtacacggtgtagttttg
ccaagagaaccaatgccttcaaatatcacagtgaggctcccaagcttggaggatcttcag
gcttttgccctagaacaatgggagtgtttcttgctgcaacttatcaactcatctcaaagt
gagaggccatcgaacatcagttcgtctatgatgaaaactttccagcggggtcttttgagt
caaagggatagagaagctccaagattaactgaaagtggtttccagttcttgttgatggat
acaaatgcgcaactctggtacatcatcagagagtacatctctaactcagaggagcgtggt
ttagattctgcagatttgatttcattcctgctagaacttagttttcatgttacaggcgag
gcatataacataaatacattgaacgagaggcagaagaatataatcaaggatcttgcagat
ttgggacttatcaaacttcagcagggaaggaaagacagttggtttatacctactgaatta
gcgactaatctatcagtcagcttgacagactcatcatcgaggaaacagggatttgttgtt
gtggaaacaaacttcagactctatgcctactcaacatctaaattacattgtgaaatttta
cgtcttttctcaagggtagaatatcaacttccaaaccttattgttggagcaataacaaaa
gaaagtttatatagtgcttttgaaaatggcatcactggagaacagataatttcttttctt
cagcagaatgcacatccacgcgttgcagagagagtaccatccgtacctgagaatgtcaca
gatcagattaggctgtgggaaacagatctgaatagggttgagatgactccagcttattat
tacgatgaatttccaaccagggaactcctcgagggtgcttctgactttgcgcgaggctat
aatgctctgctgtgggaggatgtaaactcgaaaaagatgcgtttagtggtcaaggcagaa
aaccacgtgcacatgcgagaatatcttggacgtcaaaggcagtaa
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