Pyrus communis (pear): 137726076
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Entry
137726076 CDS
T10779
Name
(RefSeq) polyadenylate-binding protein 3-like
KO
K13126
polyadenylate-binding protein
Organism
pcox Pyrus communis (pear)
Pathway
pcox03015
mRNA surveillance pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137726076
09123 Folding, sorting and degradation
03018 RNA degradation
137726076
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137726076
03041 Spliceosome [BR:
pcox03041
]
137726076
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137726076
mRNA cycle factors
Stress granule specific factors
137726076
Spliceosome [BR:
pcox03041
]
Complex C
Other components
Complex C specific factors
137726076
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_ACIN1
RBD_DEAH11
RRM_MUD2_C
RRM_3
RRM_Nup35
RRM_11
RRM_7
RRM_RdRP1_2
RRM_YTH1
Peripla_BP_4
DUF5062
PABC_AtC3H46
DUF848
Motif
Other DBs
NCBI-GeneID:
137726076
NCBI-ProteinID:
XP_068321040
LinkDB
All DBs
Position
2:32358151..32362070
Genome browser
AA seq
651 aa
AA seq
DB search
MAAVVSGPVAQPVSPAAQQAPPVAAPAVYGNVSLYVGDLDPSVNEAQLYDLFNQMGQIVS
IRVCRDQNRMHSLGYAYVNYGDPQHAANALEVLNFTPINGKPIRIMYSHRDPSIRKSGKA
NVFIKNLDKSIDHKALLDTFSTFGNVLSCKVALDSSGQSKGYGFVQFDNEESAQEAIKKL
NKMLINGKLVYVGLFQRGQERNRQNESPHFTNVYVKNLSETTTDEDLKKIMGEHGNITSA
VVMRDGSGKSRCFGFVNFEKPEAAAAAIEKLNGSTISGDKVLFVGRAQRKSEREAELRAK
FEQERLSRFEKLQGANLYLKNLDDTINDEKLKELFSEFGTITSCKVMLDQQGVSKGSGFV
AFSTPEEANKALAEMNGKMIGRKPLYVAVAQRKEERKARLQARFAQIRAPGGMMPSGLPG
YHAGAPRLAPQQLYYGQGSPGLLPQQPAGYGFQQQLLPGMRPGIGPNFIMPYHLQRQGQP
GQRMGARRGGNLQHAQQQQQQQLLHRHSNQGLRYMGNARNGVDPSLAPQGLVGPMMPLPL
DGAGLPVTRNDIHRSGPLPMSTLASALASATPENQRLMLGEQLYPLVERIEPEHTAKVTG
MLLEMDQTEVLHLIESPDALKAKVAEAMDVLDKAATKSEVTDQLGALDLNE
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtagtatcgggtccggtggctcaaccagtgtctccggccgctcaacaggcg
ccgccggttgcggctccggcggtttatgggaacgtgtcgctgtacgtaggcgatctggac
ccgagtgtgaacgaagcgcagctgtacgatctgttcaaccaaatggggcagatcgtttcg
attcgggtctgtcgggatcagaaccgcatgcactccctcggctatgcctacgttaattac
ggcgatcctcaacacgctgctaatgccctggaagtgttgaattttactccaatcaatggg
aaacccattaggattatgtactctcatcgagatccaagcattcggaagagcggaaaggcc
aatgtattcattaagaacctggacaaaagtattgatcataaggcgttattggacactttt
tcaacctttggcaacgttctttcttgcaaggttgcacttgatagcagcggtcaatcgaaa
ggctatgggttcgtacagtttgacaatgaggaatctgcacaggaggcaatcaagaagctg
aataaaatgctgataaatggaaaactggtttatgtaggactttttcaacgaggccaggag
aggaatcgacaaaatgaatcaccacatttcactaatgtttatgtgaaaaatttgtcggag
acaactacagatgaagaccttaagaaaattatgggcgagcatggtaacattactagtgcg
gttgttatgagggatggttctggaaagtctagatgttttggttttgttaactttgagaag
ccagaagcagcagctgctgcaattgagaagttgaatgggagcaccattagtggtgacaag
gttttatttgtcgggagggctcaaaggaaatccgagagggaggcggagttgagagctaag
tttgaacaggaaagactcagtagatttgagaagctacaaggtgctaatttatatctcaaa
aatctcgatgacacaataaatgatgaaaaactaaaggagctattttctgaatttggaaca
ataacatcgtgcaaggtcatgcttgatcagcaaggggtgagcaagggttctggatttgtt
gcattttctactccagaggaagccaataaagccttggctgaaatgaatggcaagatgatt
ggacgaaagcctctgtatgtcgctgtggcccaacgcaaagaagagcgaaaggctcgatta
caggcacgctttgcccaaatccgagcaccaggtggaatgatgccatcaggacttcctggt
tatcatgctggggcacctagacttgcccctcaacaattgtattatggtcaaggttctcct
ggccttctaccccaacagcctgctggttatggcttccagcagcagctcttgcctggcatg
cgcccgggtattggtccaaacttcattatgccataccaccttcagaggcaaggtcaacct
gggcagcgaatgggcgcacgtcgaggtgggaacctccaacatgcgcagcagcagcagcag
cagcagctactgcaccgtcactccaatcaaggcttgagatacatgggaaatgcgcggaat
ggagtggacccatctttggctcctcaaggtcttgtgggtccaatgatgcctttgccactt
gacggtgcagggctgcctgtgactcgtaatgatatccatcggtctgggccgttgccaatg
tcaacacttgcttcagctttagcttctgctaccccagagaatcagcgtttgatgctgggc
gaacaactatatccacttgttgagcgcattgagcctgaacacacggctaaggtgactggg
atgttgctagagatggatcagacggaggttctccatctgattgagtctccagatgccttg
aaggccaaggtagctgaggcaatggatgttctggataaagctgcaacgaagtctgaagtt
actgatcagcttggtgcattggatctgaatgagtga
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