Pyrus communis (pear): 137726135
Help
Entry
137726135 CDS
T10779
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137726135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137726135
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137726135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_6
F-box-like
LRR_8
DUF6195
F-box
DUF4239
Motif
Other DBs
NCBI-GeneID:
137726135
NCBI-ProteinID:
XP_068321114
LinkDB
All DBs
Position
2:complement(2259172..2262337)
Genome browser
AA seq
568 aa
AA seq
DB search
MDSQRKKVLVQVLNLVTSPKDRSSVSLVCKDWYDVERHSRRHVFIGNCYSVSPEIVTRRF
PNIRSVTLKGRPRFSDFNLVPPNWGGDVRQWLEVFAAEYPQLEELRLKRMTVSDESLEFL
AASFAGFKALSLLSCDGFSTDGLEAIATDCKNLTELDIQENDIDDKSGDWLSCFPETFTS
MEILNFSCLNSDVDFDALESLVSRCKSLKVLKVNKTVTLDQLRSLLTHAPQLLELGTGSF
WQELTPSQHSELERVFSNCKNLYAVSGLWQATALYLPVLYPVCTNLTFLNLSYAATLQSW
DLAKLVPYCPHLRRLWVLDTVEDQGLEAVGSNCPLLEELRVFPSSPDGDDIVDGVTGSGF
VAVSNGCPRLRYVLYFCWQMTNAAVATVAQNCPDITHFRLCIMTPAKPDHLTGEPMDEAF
GAVVKTCTKLERLSVSGLLTDLTFEYIGKYAKNLEYLSVAFAGDSDQGMQYVMNGCPKLK
KLEIRDCPFGDAALLSGLEKYESMRSLWMSACLVTMNACRSLASKVPRLNVEVMKDDEIG
DDSQADKVYVYRSIAGPRKDAPAFVLTF
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaaagaaagaaggttctggtgcaggtgctgaacctggtcacgtcacccaag
gaccggagctccgtctcgctggtctgcaaggactggtacgacgtggagcgccattctcgc
cgccacgtcttcattggaaactgctactccgtgtcgccggagatcgtgacccggcggttt
cccaacatccgaagcgtgaccctgaaggggaggccgcggttctcggacttcaatctggtg
cctccgaattggggcggcgacgttcggcagtggctggaggtgttcgctgctgaatacccg
cagctcgaggagctgaggctgaagaggatgacggtgagtgatgagagccttgagttcttg
gctgcttcttttgctgggttcaaagctctgtcgctgctcagctgtgacgggttcagcacc
gatggccttgaagccattgccactgactgcaagaatttgactgagctcgacatacaggaa
aacgacatcgatgataaaagtggagactggttaagctgcttccctgaaaccttcacgtca
atggaaatactaaacttttcctgcctgaattccgatgtcgacttcgatgctcttgagagt
cttgtaagtaggtgcaaatcactgaaggtgttaaaggttaataaaactgtaaccttggac
caactacgaagtcttctcactcatgctcctcaacttctggagctaggcaccggctcgttc
tggcaagagctcacaccctctcagcattcagaactcgaaagagtgtttagcaattgcaag
aatttatatgcagtctctggtttatggcaagcaacagctctttatctcccggttctgtat
cctgtctgtacgaatcttactttcctgaatttgagctatgcagcaactttgcaaagttgg
gaccttgctaaacttgttccttattgtccacatctccggcgcctttgggtgctggacaca
gtggaagaccaagggttggaggctgttggatcaaactgtcctttgcttgaggaactccgt
gttttcccttcttctcccgatggagatgatattgttgatggggtgactggatctgggttt
gttgctgtgtccaatggctgtccaagactccgctatgtcctctacttttgttggcagatg
actaatgccgctgtagcaactgttgcacaaaactgccctgatataacccacttccgtctc
tgcataatgaccccggcaaaaccagatcacctgacgggtgagcctatggatgaggctttt
ggtgcggtggtgaagacttgcactaaactcgaaaggctttcggtttcaggtttactgact
gaccttacatttgaatacattgggaaatatgccaagaatttggaatacctttcagtagcc
ttcgctggagacagtgatcaggggatgcagtacgtgatgaatggttgccccaagctcaag
aaacttgagatacgggactgcccgtttggggacgcagctttgctctcaggtttagagaaa
tatgaatctatgaggtcactttggatgtcagcctgccttgtgacaatgaatgcctgtcgg
tcattggcaagtaaggtgccgaggttgaatgttgaggtgatgaaggatgatgaaattggt
gatgacagtcaggctgataaagtctatgtttaccgttctattgccgggccaagaaaggat
gcccctgcttttgttctcaccttctga
DBGET
integrated database retrieval system
