Pyrus communis (pear): 137726854
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Entry
137726854 CDS
T10779
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137726854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137726854
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
137726854
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
SWI2_SNF2
SLFN-g3_helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
137726854
NCBI-ProteinID:
XP_068321911
LinkDB
All DBs
Position
2:22003096..22011134
Genome browser
AA seq
949 aa
AA seq
DB search
MEEEDVLSISDASGSSDSSSESSEEYSADQEELDQEEEEDRQNDFVVVENNRKPIDPPRP
SAEDRKLKNVDALVRGNLVVKRQPLLPRVLSVTEGAAVCRKPFKPPCSIGYEDGTDQLAR
RLCARRRFVPWGSSTAAFIPHINMNLSIENEGEKDPVEKSVTLPTGIDPLVLWQSEEFEI
AASNMVQIVVDPVLVRFLRPHQREGVQFMFECVSGLNSASNIYGCILADDMGLGKTLQSI
TLLYTLLCQGFDGKPMVKKAIIVTPTSLVSNWEAEIKKWVGERVNLIALCESTRDDVVSG
IDRFTSPHRHVQVLIVSYETFRMHSAKFSQSESCDLLICDEAHRLKNDQTMTNRALAALS
CKRRILLSGTPMQNDLEEFFAMVNFTNPGILGDAAYFRRYYEAPIICGREPNASEKERKL
SVERSAELSGTVNQFILRRTNALLSNHLPPKIIEVVCCKLTPLQIDIYNHFIHSKNVKRA
ISEDTKQSKILAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPDMFSGRSGSW
TGGDGAWVELSGKMHVLARLLAHLRKKTDDRIVLVSNYTQTLDLFAQLCRERRYPYLRLD
GTTSISKRQKLVNHFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPANDKQAA
ARVWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGLQKVIQHEQTDNPKAQGNLLSTED
LRDLFTFHENVRSDVHEKMNCIRCQNTNDTPQTTAEGEANESTNQNGQSGQVISDIGGFA
ERAGCFHQLKSSEKQVGTPLEEDLSNWGHHFSPTSVPDSILQASAGDEVTFVFTNQVDGK
LVPIESKVSPKIQEQEGKENCPRLKQNLNQKSVPLSWQRKPLESVSSGENSIRNTSAPFK
PSEKSTVKSVKTSLKGPVHVALTPKLSLNNRLPQKRSSPDSVEHDDDFV
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagatgttctctcaatctccgacgcctccggttcatccgattcctcctcc
gaatccagcgaggagtactcggctgaccaagaagagctagaccaagaagaagaagaagac
cgccaaaacgacttcgtggtggtcgagaataatcgaaaacccatagaccctcctcggccc
tccgccgaagatcggaaattgaagaacgtcgacgctctcgtcagaggtaaccttgtcgtg
aaaaggcagccactgcttcctcgagttctctcagtgacggaaggagcagcagtttgtagg
aaaccctttaaacctccatgctctattggctatgaggatggaactgaccagctcgcgcgt
cgtctctgtgcacgtagacgatttgttccctggggctcatcaactgcagcattcattcca
catattaatatgaatttgagtatagaaaatgagggtgagaaagatccagtggaaaagagt
gtgacactacctaccggaattgatcctttggtcttgtggcaatctgaagaattcgaaatt
gcggcttctaatatggtgcagatagtagtggacccagtgcttgttcgtttccttcgacca
catcaaagagaaggcgttcagtttatgtttgaatgtgtttcagggttaaatagtgcatca
aatatatatggatgcattctggcagatgatatgggtttgggaaagacattgcagtctatc
acattactatatactcttctatgtcaagggtttgatgggaaaccaatggttaaaaaggcc
attatagtcacccctaccagtcttgtgagcaactgggaggctgagataaagaagtgggtt
ggagaaagagttaatcttattgccctttgtgaaagtaccagagatgatgttgtttctgga
attgatcggttcacaagtcctcaccgccatgtacaggtactgattgtttcatatgagaca
tttcggatgcattctgcaaaatttagccaaagcgagtcctgtgaccttctcatatgtgat
gaggctcaccgcctgaagaatgatcagacaatgacgaatcgggctttggctgctctttca
tgcaagcggcgtattctgttgtcgggaactccaatgcagaatgacctagaagagttcttt
gccatggtcaattttactaatccgggaatcttaggtgatgctgcatattttcgccgctac
tatgaggcacccattatttgtggaagagaacctaatgcctctgaaaaagagaggaagcta
agtgttgaacgatcagctgaactaagtggaacagtaaatcagtttattttgcggcggact
aatgcactactatcaaaccacctcccaccaaagataattgaagttgtttgttgcaagttg
actcctctccaaatagacatatacaaccatttcatacattccaaaaatgttaaacgagca
atttctgaagacacgaagcaatcaaagattttggcttatattacagctcttaagaagcta
tgcaatcatccaaagctcatctatgatactataagaagtggaagtccgggaacttcaggt
tttgaggactgtattcgctttttccctccagatatgttctctggaagatctggatcatgg
actggcggggatggtgcttgggttgaactgtccggaaaaatgcatgttttagctcggtta
ctggcccatttacgtaagaagactgatgaccgtattgtccttgtctcaaactatacgcag
acactggacctttttgcgcaattgtgtcgagaaagaagatacccatatttgaggcttgac
ggaaccacatctatcagtaaaagacagaaattagtaaaccatttcaatgacccctcaaag
gatgaatttgtatttctcttaagcagcaaggctggtggttgtggtcttaatttaataggt
ggaaatcggctggttttgtttgatcctgactggaatcctgccaacgataaacaagctgct
gcaagagtttggagggatgggcaaaagaagagagtatacatttacagatttttgagtact
ggaacaattgaagaaaaggtgtaccagcgccagatgtcaaaagaagggcttcaaaaggtt
attcagcacgaacaaacagataacccgaaggcacagggaaaccttctttcaacagaagac
ctgcgcgatctattcacatttcatgagaatgtgaggtctgacgtgcatgagaagatgaac
tgcatccgttgccaaaataccaatgatacacctcagaccacagccgagggagaagcaaac
gaatcaaccaatcaaaatggtcagtctgggcaagtaatatctgatataggtggatttgca
gaacgtgctggatgcttccatcaattaaagagctcggagaagcaggtagggacacctcta
gaagaagatctaagtaattgggggcaccatttctccccaacttcagtacctgattctatt
ctccaagcttcagctggagatgaggtcacatttgtgtttacaaaccaagtggatgggaag
cttgtaccaattgaatcaaaagtaagcccaaagattcaggaacaagaaggaaaagagaac
tgtcccagattaaaacaaaacctgaaccagaaatccgtgccattgtcctggcaaagaaaa
ccgctcgaatctgtgtcttcgggtgaaaattctatcagaaacacatctgcccctttcaag
ccctcagaaaagtccaccgtgaaatcagtaaaaacttctttgaagggtccagtgcatgtt
gcattaacgcctaaactgtctcttaacaatcgattgccccagaaaagatcgtctcctgat
tctgtggaacacgacgacgattttgtgtga
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