Pyrus communis (pear): 137726934
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Entry
137726934 CDS
T10779
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
KO
K10683
BRCA1-associated RING domain protein 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137726934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137726934
04121 Ubiquitin system [BR:
pcox04121
]
137726934
03036 Chromosome and associated proteins [BR:
pcox03036
]
137726934
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137726934
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
137726934
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
137726934
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
137726934
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
137726934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-HC5HC2H_2
PTCB-BRCT
PHD_NSD
zf-C3HC4_4
zf-RING_6
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
Prok-RING_4
RTT107_BRCT_5
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
137726934
NCBI-ProteinID:
XP_068321989
LinkDB
All DBs
Position
2:11545553..11550503
Genome browser
AA seq
694 aa
AA seq
DB search
MVDAIPNRKCSDSSSTRSMMNPWVLHFQKLGLELKCPLCLNLLNRPTLLPCDHIFCNCCI
PSSSCPVCKAQVADQDLRPVPFMENIVAIYKSLDASFCANLFQPVSSDVRTILEQHPVLP
NISFAGKMTIEPFDNDQGGNSNSGQSIYSSSAHERVCAPCSLNRSVADGVGNNDKVDKCS
MPIDANGKVLDFARSGVGNPNSQLPSCQIRAGGLDECMIVERDMNHAAQSLPNSPPSFGD
AKCSDNDSCGRRCEQISENSLVRRSISKIDDGRVGQKRHDSCATEIDGHLRKKIKYEPVL
ETYSELEHKFSTPPNESFTKRTICVFCQSSTILEVTGPMLHYSKERLVEGDEANASNVIH
VHRICIDWAPQVYFEGENVKGLKAEVSRGAKLKCTKCGLKGAALGCFVKSCRRSYHVTCA
TEISKCRWDKENFLLLCPAHRSTKFPGEKSNYGKPKICLPSNSLEAPNEMNQWIICPSGL
SSEEKLVLNKFAKKTGATVSKTWRPNVTHLIAAVDGDGAYVRTFKTCMAILAGRWILKID
WVKACMEATDHVNEEPYEVSLDNYGCCDGPKTGRLRATNNDLKLFNGLSFYFAGDFVLDR
KEDLQDLIIVAGGTVFNSSEEVMERSCLEHTASRTLVVYNLDPPEGCKLGEEVSILWQRS
NEAQDIAAKIGSQIIGHTWLLESIARCELQPFVC
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgcaattcctaaccgaaaatgcagcgacagtagcagtaccaggtcgatgatg
aacccgtgggttctccatttccagaaactgggtctcgagctcaagtgtcccctctgcttg
aatttgcttaatcgaccgacgttgcttccatgcgatcacattttctgcaattgctgcata
cccagttcgagttgcccggtttgtaaagctcaggttgcggaccaagatctcaggcctgtg
ccattcatggaaaacatagtagcgatctacaaaagcttggatgcgtctttctgtgccaat
ttgttccagcctgtttcttccgatgttagaaccattctggagcaacaccctgttttgcct
aatatcagttttgctgggaaaatgactatagaaccatttgacaatgaccaaggaggtaat
tcaaacagtgggcaatccatctattcatcaagtgctcatgaacgagtttgcgctccttgt
agtttgaatcgttctgtagctgatggagttggcaacaatgacaaagtagataagtgtagc
atgccaatagatgctaatggcaaggtattagattttgctagaagcggagtgggaaacccc
aattcacaactaccaagttgtcaaataagagctggtggactcgacgagtgcatgattgta
gaaagagacatgaatcacgcagcacagtcattgcccaacagtcctccttcatttggtgat
gccaaatgttcagataatgatagctgtggtcggcgctgtgagcaaatttcagaaaattct
ttggtcaggagatcgatcagcaaaattgatgatggtagagtagggcagaaaagacatgat
agttgtgcaactgaaattgatggtcatttaagaaagaaaataaagtatgagccagtttta
gagacttattctgagcttgaacataagttcagtacaccacctaatgaatcattcacaaag
agaacaatttgtgtattttgtcagtcttctacgatcttggaggttacagggccaatgttg
cattattctaaagagagactggtagagggagatgaggcaaatgcttcaaatgtcatacat
gttcacagaatatgcattgattgggcaccgcaagtgtatttcgaaggtgaaaatgttaag
ggattgaaggcagaagtctcaaggggtgcaaaactaaaatgcaccaaatgtgggctaaag
ggagcagctttgggatgctttgtaaagtcctgccgaagaagctatcatgttacctgtgca
actgaaatttctaaatgtcgttgggacaaggaaaactttctgctgctatgtccagctcat
cgttcaactaaatttcccggggagaagtcaaattatgggaagcccaaaatctgtctcccg
tccaacagtttggaagctccaaatgaaatgaatcaatggatcatatgcccatccggtttg
tcttctgaagaaaagcttgttttaaacaagtttgccaagaagactggggcaactgtgtcc
aagacctggagaccaaatgttacacatttgattgcagccgtggatggggatggtgcatat
gtcaggacattcaaaacttgcatggccattttggctggaagatggattctgaaaattgac
tgggtgaaagcatgcatggaagccacagatcatgtgaatgaagaaccgtatgaagttagt
cttgataactatggatgctgtgatggcccaaaaactggcaggcttcgggcaacaaacaat
gatctgaaactctttaatggtttgagtttctattttgctggtgattttgtactggataga
aaggaagatcttcaagatttgatcattgtagcaggaggcactgttttcaacagctcagaa
gaagtgatggaacgaagttgtcttgaacatacagcttcaaggacactagttgtatacaac
ctcgacccaccagaaggttgcaagttgggggaagaagtttcaatcctttggcaacggtca
aatgaggcccaggatatagctgcaaaaattggatcacaaatcatcggtcacacatggctc
ttggaatcaattgcaagatgcgagttacagccttttgtctgttga
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