Pyrus communis (pear): 137727443
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Entry
137727443 CDS
T10779
Name
(RefSeq) DNA damage-binding protein 1-like
KO
K10610
DNA damage-binding protein 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox03420
Nucleotide excision repair
pcox04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
137727443
09124 Replication and repair
03420 Nucleotide excision repair
137727443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137727443
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137727443
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Adoptor protein
137727443
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
137727443
TCR (transcription coupled repair) factors
Cul4-CSA complex
137727443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
137727443
NCBI-ProteinID:
XP_068322403
LinkDB
All DBs
Position
3:complement(25146173..25155071)
Genome browser
AA seq
1089 aa
AA seq
DB search
MSVWNYVVTAHKPTNVTHSCVGNFTAPQELNLITAKCTRIEIQLLTPLGLQPILDVPIYG
RIATLELFRPHGETQDFLFIATERYKFCVLQWDAEASELITRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDVRHVKTYEVSLKDKDFVEGPWAQNNVENGADLLIPVPPPLCGVLIIGEDNIVYR
SPNTFKAIPIRHSITRAYGRVDADGSRYLLGDHAGLLHLLVITHEKEKVTGLKIELLGET
SIASTISYLDNAFVYIGSSYGDSQLVKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAFKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVCNQLVQVTSSSVRLVSSTTRELK
HEWNAPAGNSINVATANATQVLLATGGKHLVYLEIGDGVLTEKNHTQLDFEISCLDINPI
GDNPNYSQLAAVGMWTDISVQIYSLPDLSRITKEHLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFILNTSTGELTDRKKVSLGTQPITLRTFSSKGTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEQSRTFAILSVKYNQSSAEDSETHFIRLLDDQSFDLITFYQLDTFEYACSILSCSFSDD
SNLYYCVGTAYVLPEENEPTKGRILVFIVEDGKLQLVAEKETKGSVYSLNAFNGKLLAAI
NQKIQLYKWTLRDDGTRELQSECGHHGHILALYVQTRGDFIIVGDLMKSISLLMYKHEEG
AIEERARDYNANWMSAVEILDDDVYIGAENFVNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFVNRFRHGSLVMRLPDSDVGQIPTVIFGTVNGVIGVIASLPQEQYAFLEKLQANLRKV
IKGVGGLNHEQWRSFSNEKKTVDAKNFLDGDLIESFLDLSRSKMDEISKQMRVSVEELCK
RVEEMTRLH
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtatggaactacgtcgtaacggctcacaagcccaccaacgtcacccactcctgc
gtcggcaacttcaccgcccctcaggagctcaatctcatcactgcgaaatgtacgcgaatt
gaaattcagctacttactcctctgggactgcagcctatcttggatgtcccaatatatgga
agaatagcgacgcttgaacttttccggcctcatggtgaaacacaggattttctatttatt
gcaacagaaaggtacaaattttgtgttcttcagtgggatgccgaagcatctgagctcatc
acaagggcaatgggggatgtctcagatcgcataggtcgtcctacagacaatggtcaaatt
ggtattattgatccagattgcagattaattggactccatttgtatgatggattgtttaag
gttattccttttgataataaagggcagctcaaggaagcatttaatatacggcttgaggaa
cttcaagttttggatatcaagtttctatatggttgttcaaaaccaacaattgtagttcta
tatcaggataataaagatgttcgccatgtcaaaacatatgaggtttctctgaaggataag
gattttgtcgaaggtccttgggcacagaacaacgttgaaaatggggctgatttgttaata
ccggttcctccaccactctgcggtgttcttattattggagaagataatattgtttaccgc
agcccaaatacatttaaagcaatcccaataagacattccatcacaagagcctatgggaga
gtagatgcagatggttccaggtatttacttggtgatcatgccgggctacttcacctactt
gttataacgcatgagaaagaaaaggtgactggactgaaaattgagctcttgggggagaca
tcaattgcatctactatttcataccttgataatgcatttgtctatatcggatcaagttat
ggggattcacagcttgtaaagctaaatctacagcctgatgcaaagggttcatatgtggaa
gtcttagaaaggtacgtcaatttggggccgatcgttgacttttgtgtggttgatcttgag
aggcaaggccaaggtcaggttgtaacttgttctggagctttcaaggatggttctcttcgt
gtagttcggaatggaattggaatcaatgaacaggcatcagttgagcttcaaggtatcaag
ggaatgtggtcattaagatcctccactgatgatccttttgacaccttcctggttgtaagc
tttatcagtgagacaaggattttggcaatgaatcttgaggatgagttggaagaaactgag
atagaaggcttctgttctcaagttcagactttattttgccacgatgccgtctgtaatcaa
ctggtacaggtcacttcaagctctgtacgattagtcagttctacaaccagggagctcaag
catgagtggaatgctccagcaggcaattcgattaatgttgccactgctaatgccacccag
gttttattggcgactggtggaaagcatttagtttatttggaaataggtgatggggtattg
acagagaaaaaccacacacagttagattttgagatatcatgccttgacataaaccccata
ggcgacaatcccaactatagccagctggcagctgttggaatgtggacagatattagtgtc
cagatatattcacttcctgacctgagccgcatcacaaaggaacatttgggaggggagatc
atacctcgttctgttcttctttgtgcctttgaagggatatcctacctattgtgtgccctt
ggagatgggcacctcttaaactttattttgaacacaagcactggtgagttgacggacagg
aaaaaagtctcgcttgggacgcagcccattacactccgtaccttctcatccaagggtact
acgcatgtatttgctgcatcagataggccaactgtcatctatagtagcaacaagaaattg
ctttacagcaacgtaaatctgaaagaagtcagccatatgtgcccattcaactctgctgct
tttccagacagccttgcaattgctaaggaaggtgaacttactatcggcacaattgatgac
atccagaagcttcatattcgctctattcccctaggcgagcatgcacgacgtatctgtcat
caggagcagtccaggactttcgccattttgagtgtgaaatataaccagtctagtgcagaa
gactcagaaacacacttcatccgattgttagatgaccagagttttgacctcattacattt
tatcaactggacacttttgagtatgcctgctctatacttagctgttctttctcagatgac
agtaatttatattactgtgtcgggactgcatatgttctcccggaagaaaatgagccaacc
aagggccgcattctggttttcattgttgaagatgggaagctgcagctcgttgctgagaag
gaaaccaaggggtctgtttactcgttgaatgcgttcaatggcaagttacttgctgctatt
aatcagaagatacagttatacaagtggactctgcgggacgatggtactcgtgaattgcaa
tcggaatgtggacaccatggccacatacttgccctttatgtccagactcgtggagatttc
atcattgttggggacttaatgaagtcaatttctctgttaatgtacaagcatgaggaaggt
gccattgaggaacgagcccgtgattataatgcaaattggatgtctgctgtagagatcctc
gacgacgatgtttacattggagctgaaaatttcgtcaacctgttcactgttcgtaaaaat
agtgagggtgcaactgatgaggaacggggccgccttgaggttgtaggtgagtatcaccta
ggcgagtttgtcaataggttccggcacggctctcttgtcatgcggttgccagactctgac
gtgggccagattccaactgtcatctttggcaccgtcaatggtgtaattggagtaattgcc
tcacttcctcaagaacaatatgcatttttggagaagctccaggcaaacttgaggaaggtg
ataaagggtgttggagggttgaaccatgagcagtggagatcattcagcaacgagaagaaa
actgtagacgcgaaaaatttcttggatggcgatctgatagaatcgttccttgatctcagc
cgtagcaagatggacgagatctcaaaacaaatgcgcgtttcagtggaggagctctgcaag
agagtagaagaaatgacaaggctgcattga
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integrated database retrieval system
