Pyrus communis (pear): 137727652
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Entry
137727652 CDS
T10779
Name
(RefSeq) vacuolar sorting protein 3-like
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
pcox Pyrus communis (pear)
Pathway
pcox04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137727652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pcox04131
]
137727652
Membrane trafficking [BR:
pcox04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137727652
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Vps39_C
Clathrin
Vps39_1
CNH
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
137727652
NCBI-ProteinID:
XP_068322578
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Position
3:complement(24299917..24309163)
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AA seq
1006 aa
AA seq
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MAKPEPRGRTVLEPLSLFNLSDHSRARVTSLAISTVSDSQCLVYLGTQFGILLLLSVNPN
DQSPSDPSNNPSIPQNISFLRKVLVGNSSVESIQVFGEIGKLLVLLDGFLFLVDSLLLQP
VKRLSFLRGISVITRRLRSSESECSNLSGLSNSSEYTSTSQRFLQKFGSGIRTNGSKTKE
TVQQRIGHHVFSIVIGKRLVLVELVLSNRVGKSDQDIDDGSFVILKEIQCIDGVMAMVWL
NDSIIVSTVNGYSLFSCVTGQSGVIFSLPDVSSLPRLKLLCKEWNVLLLVDNVGIIANAH
GQPVGGSLVFHSNLDSIGEISSYVVIARDGKLELYHKKTGRCIQMITFGGEGVGGPCIVA
DEEDGSGKLLLVATPSKVVCYRKLPSEEQIKDLLRKKNFKEAISLVEDLECEGELSKDML
SFVHAQVGFLLLFDLHFEEAVNHFLQSETMQPSEVFPFIMRDPNRWSLLVPRNRYWGLHP
PPAPLEDVVDDGLMAIQRAIFLRKAGVETVVDDAFLLNPPNRDKLLESAIKSITRYLEVS
REKELTPSVKEGVDTLLMYLYRALNNVYDMEKLASSENSCVVEDLETLLDDSGHLRTLAF
LYASKGISSKALGIWRILARNYSSGLWKDPMLESGSQDGGTNIISGKETAAAEASKLLEE
SSDPNLVLQHLGWVADINQVFAVQVLTSEKRANQLPPDEVIAAIDPKKVEIFQRYLQWLI
EDQEYSDSQFHTLYALSLAKSAIEAFQADIASQNLGPGRIEETNISDDGTSLIFQSPVRE
RLQMFLESSDLYDPEEVLDLIEGSELWSEKAILYKKLGQEALVLQILALKLENSEAAEQY
CAEIGRPDVYMQLLDMYLDPQDGKEPMFKAAVRLLHNHGESLDPLQVLERLSPDMPLELA
SETILRMLRARLHHHRQGRIVHNLSRALDTDASLAILEEKSRHVQINDESLCDSCHARLG
TKLFAMYPDDTIVCYKCFRRQGESTSVTGRNFKQDVLVKPGWLVTR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcccgaacctagaggtcgcactgtccttgaaccactgtcattgttcaacctc
tctgaccactctcgtgcacgagttacatcactcgctatctccacggtctccgactcacaa
tgtctagtctaccttgggacccagtttggaatcctgcttttgctctctgtaaatcccaat
gatcaatccccatctgatccttccaacaacccttcaatcccacaaaacatttcgtttttg
cgaaaagttttggttggcaattcctcagtagagtctatccaagtgtttggtgagattggg
aagctcttggtgcttttggatggatttttgtttttggttgattcgcttctgttacagccc
gtgaaaagattgagtttcttgagaggaatttctgtcatcacaaggaggctgcgaagcagt
gaatcagaatgctcgaatttgtcaggtcttagtaattcatcagagtatacaagcacaagt
cagcggtttttgcaaaagtttggaagtgggatcagaacaaatggctcaaaaacgaaagaa
actgtgcagcagcgtataggccatcatgttttctctattgtgattggtaaaagattggta
ttggtagagcttgttttgagtaatagagtaggtaaaagtgaccaagacattgatgatggg
tcttttgtaattctgaaggaaattcagtgtattgatggggttatggccatggtatggctc
aatgattcgataattgtcagtacggttaatggatatagtttgttttcatgtgttaccgga
caaagtggtgtaatattttcgctaccggatgtttctagtctgccacggcttaaattgttg
tgtaaagaatggaatgtgcttttgttggtggacaatgttggcatcatagctaatgcacat
gggcagccggttggtggtagcttggtgttccatagtaacctggattctattggggagata
tcttcatatgtggtcattgcaagggatggaaagctggagttgtatcataagaaaacaggt
agatgtattcagatgatcacttttggtggtgaaggggtaggagggccttgcattgttgca
gatgaggaagatggaagtggaaaacttcttcttgttgcaaccccctccaaggttgtttgc
tatcggaaattaccatctgaagaacaaattaaagatctattgagaaaaaagaacttcaag
gaagctatctccttggtggaggatcttgagtgtgagggtgaattatcaaaggatatgctc
tcgtttgttcatgctcaagtggggtttctcttgctttttgacttgcattttgaggaagca
gtgaatcactttttgcagtctgagacaatgcagccttctgaagtatttccattcataatg
agagatccgaatcgatggtcattactggttcctagaaaccgctattggggtttgcatcct
ccccctgcgcctctggaagatgttgtggatgatgggttgatggcaattcaaagagcaatc
tttcttaggaaagcaggtgtagaaactgtggtagatgatgcatttctcctgaatccacca
aatagggataaattgttggagtctgccatcaaatcaattacaaggtatttggaggtttct
cgtgagaaagagttgactccatcagtgaaggagggagttgacaccctattaatgtacctc
tacagagccttgaataatgtttatgacatggagaagctggcatcatcagagaattcttgt
gttgtggaggatttggaaactttgttagatgactccgggcatttacgtacgcttgccttc
ctatatgcaagtaaaggaattagctcaaaggctcttggtatctggcgcatcttggcaaga
aattattcatctggcctttggaaagaccccatgttggagagtggttcacaggatggtggt
acaaatatcatctctggtaaggagactgctgcagctgaagcatcaaagcttctcgaggag
tcatctgatccaaaccttgttcttcaacatcttggatgggttgcagatatcaaccaggtt
tttgcagttcaggttttgacatcagagaaaagagctaatcaacttccaccagatgaagtt
attgcagctattgatccaaagaaggtggagatttttcaaaggtaccttcagtggttgatt
gaagaccaagaatacagtgacagtcagttccacacattatatgctctctcacttgccaag
tcagcaattgaagcatttcaagcagatattgcctcgcaaaaccttggtcctggaaggata
gaagagacaaacatttctgatgatggaacaagtttgatatttcaaagtcctgttcgggaa
agactgcagatgtttttagagtcttcagacttgtatgacccagaggaggttctagactta
atcgagggatcagaattgtggtcggagaaggctattctttacaagaaactagggcaagag
gcattggtgctccaaattttagccttgaagctggaaaacagtgaagctgctgagcaatat
tgtgctgagattgggagacctgatgtctatatgcagttacttgatatgtatttggatccg
caagatggtaaggagcctatgtttaaagctgctgttcgcctactccacaatcatggggaa
tcattggatcctttgcaagttttagagagattgtccccagatatgcctcttgaacttgct
tctgagactatactaagaatgctgagagctcgacttcatcatcaccgtcaaggaaggatt
gtgcacaatctgtcacgtgctttagatacagatgcaagtttagcaatattggaggaaaag
tcaaggcatgtgcagatcaatgatgaaagcctttgtgattcttgccatgcacgccttgga
actaaactatttgctatgtacccggatgacaccatagtctgttacaagtgtttccgtcgt
cagggtgagtctacatcagtcactggtcgcaactttaaacaagatgtcctagtgaaaccg
ggttggcttgtgacccggtaa
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