Pyrus communis (pear): 137727876
Help
Entry
137727876 CDS
T10779
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03020
RNA polymerase
pcox03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
137727876
09124 Replication and repair
03420 Nucleotide excision repair
137727876
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137727876
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137727876
Enzymes [BR:
pcox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
137727876
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
137727876
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
137727876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
137727876
NCBI-ProteinID:
XP_068322813
LinkDB
All DBs
Position
3:27764269..27771392
Genome browser
AA seq
1193 aa
AA seq
DB search
MEEEHEYDDQQYMEDDDEDEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVD
ESADIEIRPESQHNPGHQPDFAETVCKISFGQIYLSKPMMTESDGETATLFPKAARLRNL
TYSAPLYVDVSKRMIKKGHDGEELTETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTEL
GECPYDQGGYFIINGSEKVLIAQEKMSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS
TMFVRMLARTSSKGGSSGQYIKATLPYIKGEIPIIIIFRALGFVADKDILEHICYDFSDT
QMMELLRPSLEEAFVIQNQQVALDYIGKRGANVGVSRDKRIKYAKEILQKEMLPHVGVGE
FCETKKAYYFGYIVHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRNLFRKLTKDV
RAYAQKCVDNGKDLNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYA
STLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQACGLVKNLALMVYITVGS
AAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDPEMLVRTLRKLRRRVDV
NTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKRDIHALQQRESPEDAGWHDL
VAKGYIEYIDTEEEETTMISMTINDLVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIP
FPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQL
PAGINAIVAISCYSGYNQEDSVIMNQSSVDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRP
DRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIGKTTPMAQDEAPGQASSRYTRRDHS
ISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQED
MPWTVEGVTPDIIVNPHAIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKA
LHSCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQP
AEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNS
FECRGCKNKTDIVQVYIPYACKLLFQELMSMAIAPRMLTKDIKPAKNQKKKGG
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggagcacgagtacgacgatcagcagtacatggaggacgacgacgaagacgaa
atcacgcaggaggacgcgtgggccgtcatctccgcctacttcgaggagaagggtttggtg
cgccagcagctcgactcgttcgacgagttcattcagaacacaatgcaggagattgtcgac
gagtctgccgatattgagattcggcctgagtcgcagcacaaccctgggcatcagcccgat
ttcgccgagactgtatgcaagattagctttggtcagatttatttgagtaagcccatgatg
accgaatctgatggagaaactgcaaccttatttcccaaagctgcaaggctgagaaatctg
acgtactcagcacccttgtatgtggatgtctcaaagaggatgataaagaaaggacacgat
ggcgaagaactcaccgagacccaggatttcaccaaagtattcattgggaaggttcctata
atgcttcggtctagttattgcacactgtaccagaattcagagaaagatttaactgagctg
ggagagtgtccatacgatcaaggtggatattttattataaatgggagtgaaaaggttctt
attgctcaagagaagatgagtaccaatcatgtctatgtgttcaagaagaggcagccgaac
aagtacgcctatgtggctgaagttcggtctatggcggagtctcaaaacaggccgcccagt
accatgtttgttcggatgcttgcccggactagttctaaagggggttcttcgggacagtat
atcaaagctacacttccttatattaaaggggaaattcctattattatcattttccgggct
cttggttttgttgccgataaagacatcctcgagcacatatgttatgacttttctgatact
caaatgatggagttgctgagaccttctttggaagaagcatttgtgattcagaatcaacag
gttgcactagattatattggaaagagaggtgcaaatgtcggtgtgagtagagacaagaga
atcaagtatgcgaaagagattctacaaaaggaaatgcttccacacgttggtgttggagaa
ttttgtgagacaaagaaagcttactattttggatatatcgttcacaggcttctactctgt
gcacttggtcggaggccagaggatgacagggatcattatggtaacaagcggcttgatctt
gctggtcccttacttggaggcttgtttagaaatctattcaggaagttgactaaggatgtg
agagcttatgcacagaagtgtgttgacaatggaaaggatcttaatctgcaatttgccatc
aaagctaaaaccatcacgagtggcctcaaatattcacttgccactggaaactggggacaa
gcaaatgcagctggtacaagggctggcgtgtcgcaggtgttaaatcgtttgacatacgca
tccaccctctcacacttgagaagactgaattctccaatagggcgtgaagggaaattggct
aaaccacgtcagctgcataattcgcaatggggaatgatgtgccctgctgaaacacccgaa
ggccaagcgtgcgggcttgtcaagaatcttgcattgatggtatacataacggtaggatca
gctgcatatccaatcttggaatttttggaagaatggggtacagaaaactttgaggaaata
tctcctgcggttataccccaagctacaaaaatttttgtgaacggctgttgggttggaatc
catcgtgatcctgaaatgttggtgagaacattaagaaagctaaggcgacgggttgatgtc
aacactgaagttggggttgtgagggatatccgtctgaaagaattgcggatatatactgac
tatggccgttgcagtcgtccattattcattgtggacaaacagaggcttctcataaagaag
agagatattcatgcattgcagcagagggaaagccctgaagatgctggttggcatgacctt
gtagcgaagggatatattgaatatattgacactgaagaagaggagactacaatgatttcc
atgacaattaatgatcttgtccaagcaagactcaatcctgaggaggcatattcggacact
tatacacattgtgaaatccacccatcacttattttgggtgtttgtgcttctattatacca
tttcctgatcataatcagtctccacgtaatacgtatcaatctgctatggggaagcaagct
atggggatttatgtcaccaattatcagttccggatggatacattggcgtatgttttatac
taccctcagaaaccgcttgtcaccacacgagccatggagcatctccacttccggcagctt
cccgctggcatcaatgctattgttgccatttcttgttattccggttataaccaggaagat
tctgtcattatgaatcaatcctctgtggaccgtggattcttccggtcactattcttccga
tcttatagggacgaggagaaaaagatggggacccttgtcaaagaggattttgggcgtcct
gacagagcaaatactatgggtatgcgacatggttcttatgacaaattggatgatgatggt
cttgctcctcctggaactagggtttcaggtgaggatgtcatcataggaaagaccacaccc
atggctcaggacgaggctccagggcaagcgagttcacgttacacgcggcgtgaccacagc
ataagcttgcgccacagtgaaaccggcatagttgatcaggttctactgacgaccaatgcc
gatgggttgcggtttgtcaaagtaagggtgaggtctgtcagaataccacagattggtgac
aaattcagtagcagacatggacagaaagggacagtgggcatgacttatacgcaggaagac
atgccatggactgtggaaggggtcacacccgatataatcgtgaacccacacgctattccg
tctcgcatgacaattggtcagctgatcgagtgtatcatggggaaggttgcagctcacatg
ggaaaggaaggagatgctactccttttacagatgtgacggtggacaatatcagtaaagct
cttcacagttgtggttatcaaatgcgtggattcgagaccatgtataatggtcacacgggc
aggcggctcagtgctatgatattccttggccccacatattaccaaagactgaagcacatg
gtcgacgacaagatccattcacgtggacggggcccagtgcagatcctcacaaggcagcct
gctgagggacggtctcgtgatggtggtctacgatttggagaaatggaacgagattgcatg
attgcccatggtgctgctcactttctgaaagaaagattgttcgaccagagtgatgcatat
agggttcatgtctgcgagcgttgtgggttaatagctattgcaaatctcaagaagaattcg
tttgagtgcaggggttgcaagaacaaaactgacattgttcaggtttacattccttatgcc
tgcaagctgctattccaagagctcatgtcgatggccatagcgccaagaatgctcacaaag
gacataaagccggccaaaaaccaaaagaagaaaggaggctga
DBGET
integrated database retrieval system
