Pyrus communis (pear): 137728010
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Entry
137728010 CDS
T10779
Name
(RefSeq) chaperonin CPN60-2, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137728010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137728010
03110 Chaperones and folding catalysts [BR:
pcox03110
]
137728010
03029 Mitochondrial biogenesis [BR:
pcox03029
]
137728010
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcox04147
]
137728010
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
137728010
Messenger RNA biogenesis [BR:
pcox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
137728010
Chaperones and folding catalysts [BR:
pcox03110
]
Heat shock proteins
HSP60 / Chaperonin
137728010
Mitochondrial biogenesis [BR:
pcox03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
137728010
Exosome [BR:
pcox04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
137728010
Exosomal proteins of other body fluids (saliva and urine)
137728010
Exosomal proteins of breast cancer cells
137728010
Exosomal proteins of colorectal cancer cells
137728010
Exosomal proteins of bladder cancer cells
137728010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
137728010
NCBI-ProteinID:
XP_068322990
LinkDB
All DBs
Position
3:complement(19279126..19283520)
Genome browser
AA seq
567 aa
AA seq
DB search
MWGFLLFTVQIGSKLISRRNYAAKEIRFGVEARAGMLRGVEELADAVKVTMGPKGRNVVL
EQSFGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDAAGDGTTCATVLTRAIF
TEGCKSVAAGMNAMDLRRGISMAVDSVVANLKSRARMISTSEEIAQVGTISANGEREIGE
LIAKAMEKVGKEGVITIADGKTLYNELEVVEGMKLDRGYISPYFITNPKNQKCELEDPLI
LIHEKKLSNLNSIVKILELALQKQRPLVIVAEDVESEALATLIINKLRAGIKVCAIKAPG
FGENRKANLQDLAILTGAQVITEELGLNVEKVGVETLGTCKRITVSKEDTVILDGAGDKK
AIEERCEQLRSSIELSTSDYDKEKLQERLAKISGGVAVLKIGGASEAEVGEKKDRVTDAL
NATKAAVEEGIVPGGGAALLYASKELDKLVTANFDQKIGVQIIQNALKMPVSTIASNAGV
EGAVVVGKLLEQDNPDLGYDAAKGEYVDMIKAGIIDPLKVIRTALVDAASVSSLMTTTEA
VVVELPKDEKESPAMGGGMGGMGGMDY
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgtggggatttttgttgtttactgttcagattggtagtaaattgatttcgagaaggaac
tatgcggcgaaagaaatcagattcggtgttgaagcccgggccgggatgcttaggggtgtg
gaagagctcgctgatgctgttaaagtcacaatggggccaaaagggcgcaatgttgttcta
gaacaaagctttggtgcccctaaagtgaccaaggacggtgtcactgtagcaaagagtatt
gagttcaaggataaagtcaagaacattggtgctagtcttgtaaagcaggttgcaaatgct
acaaacgatgcagcaggagatggtaccacttgtgctacagtccttacccgcgctatattt
accgaaggatgcaagtcagtggcggctggaatgaatgctatggacctaagacgaggcatt
tcaatggcagttgattccgttgttgcaaacttgaagagtagggctcggatgatcagcaca
tctgaagaaatagctcaggttggtacaatatcagcaaacggagagagggaaattggtgag
ctaatagctaaggctatggagaaagttggcaaagagggtgttataaccatagctgatgga
aaaacactgtataacgagttggaggtcgttgaaggaatgaagctggataggggctacata
tccccttattttatcaccaatccgaagaaccaaaaatgtgaattagaagacccactcatc
ctgatccatgagaagaaactctcaaatctaaattctatagtgaaaatattagagttggcc
ttgcagaaacaaagacctcttgtgattgttgcggaagatgtggaaagtgaagctctagcg
acgctcattataaacaagcttcgtgctggaattaaggtttgtgcaattaaagcccctgga
tttggagaaaacaggaaggcaaatttgcaggacctagccattcttacgggagcccaggta
ataactgaagagcttggtctgaacgttgaaaaagtgggagtagagacacttggaacatgc
aaaaggattacggtatcaaaagaagacaccgtcattcttgatggggctggtgacaagaaa
gccattgaagaaagatgtgaacagctgagatcatcaattgaattgagcacttctgattat
gacaaagagaagttacaagagcgccttgcaaagatttctggtggtgttgccgtcttaaag
attggtggagcgagcgaagcagaagttggtgaaaagaaggatagagtaactgatgctcta
aacgccaccaaggctgctgtagaggaaggaattgtacctggtggtggtgctgcccttcta
tatgcctcaaaagagctggacaagttggtgactgccaactttgatcaaaagattggtgtt
caaataattcagaatgctctcaagatgcctgtgtccacaatagcttctaatgccggagtc
gagggggctgttgttgttggcaaactattggagcaggacaatcctgaccttggatatgat
gcagcgaaaggtgaatatgtagacatgattaaggctggaatcattgatccattgaaagtc
attagaaccgccttggtagatgctgcaagtgtttcctcgttgatgaccactactgaggct
gttgttgttgagcttcctaaggacgagaaggaatcccctgcaatgggaggaggcatggga
ggcatgggaggcatggattactag
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