Pyrus communis (pear): 137728014
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Entry
137728014 CDS
T10779
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
pcox Pyrus communis (pear)
Pathway
pcox03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137728014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcox03021
]
137728014
Transcription machinery [BR:
pcox03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
137728014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
DUF1258
ZnF_RZ-type
C1_1
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
137728014
NCBI-ProteinID:
XP_068322995
LinkDB
All DBs
Position
3:complement(30094425..30098500)
Genome browser
AA seq
546 aa
AA seq
DB search
MSTTDLILRPECGGCKTTKDLYGSNCKHLTLCDDCGKKMALNRAKCNECGAVVTRLIREY
NVRATTANDKNYFIGRFVTGLPSFSKNKNFENKWSLHKDGLQGRQLSDAMREKYKNKPWV
LEDESGRSQYQGHLEGAQTATYYLLIKHPSGKEFSAIPAGSWFNFNKVAQYKQLTLEEAE
EKISNRKKTADGYERWMMKAANNGAALFGEVERLDKDNGGAGGKVRRKTAGGDDDEEGNG
SDRGDEDDDEELERKKRLNKRGGDGGDGDDDNEGVGGGDVDMDDDDIEKGDDWEHEEIFT
DDDEAVGNNPEEREDLEPEIPAPPEIKQDDEDEDEDDKEGGLSKSGKELKKLLGRSGGLN
DSDVEDDDDDDDDLDDDIGFPPALAPKQKDAPKEEPSDNSPSKPTPSASSRGTTPTSKPS
KGKRKSSGDDSKATNSAPPKKVKTENEQKSIKEEPVSVSASKSSAPPKGTPPVKTEPSSS
GGRVTEEEIRAVLMQRTPLTTNDLVSKFKGRLKSSEEKTAFSNILRRISKIKKGNGTSSY
IVLKER
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgaccgatttaatactgagacctgagtgtggcggatgtaaaacgaccaaggat
ttatacggaagcaattgcaagcacttgactctgtgcgacgactgtggcaaaaaaatggct
ctcaaccgcgccaagtgcaacgagtgcggcgccgtcgtcactcgcttaattcgagagtat
aatgttcgagcgactactgccaacgataagaactacttcattgggagatttgtgacgggg
ttgccgagtttttcgaagaacaagaattttgaaaataaatggtctctccacaaagatgga
ctacaaggacgccaacttagtgatgccatgcgggagaagtacaagaacaaaccatgggtt
ttggaggatgaaagtggccggtctcagtaccagggtcatcttgaaggtgcacagactgca
acttactacttactaataaaacatccctctggaaaggagttttctgctattcctgctggt
tcttggttcaatttcaacaaggttgcgcaatacaagcaacttacattggaggaagctgaa
gagaagattagtaataggaaaaagactgcagatgggtatgaaagatggatgatgaaagct
gcaaataatggagctgctttatttggtgaagtagagaggcttgacaaggataatggtggg
gctggtgggaaggtacgaagaaagacagctggtggtgatgatgatgaagaaggaaatggc
tcagatagaggggatgaggatgatgatgaagagttggaaaggaaaaaaagattgaataaa
agaggtggtgatggtggtgatggtgatgatgataatgaaggtgtagggggaggtgatgtg
gacatggatgatgatgatatcgagaagggtgatgactgggagcacgaagaaattttcact
gatgatgatgaagctgttggaaacaatcctgaggaaagggaagatttggaaccagagatt
ccagctcctccagaaattaagcaggatgatgaggacgaggatgaagatgacaaagagggt
ggactaagcaaatcaggaaaagagttgaagaagctacttgggcgaagtggtggactgaat
gattcagatgtagaggatgacgacgatgacgatgatgatctggatgatgatattggcttt
cctccagcgctggctccaaagcagaaggatgcacccaaagaggaaccatctgacaacagt
ccctcaaaaccaacaccttctgcgtccagtcgaggaactacacctacctccaaaccctca
aagggaaagagaaaatcaagtggcgatgattctaaggcaacgaacagtgcacctcccaag
aaggtcaagactgaaaatgaacaaaaatccatcaaagaggagcctgtgtctgtgtctgct
tctaaaagtagtgcgcctccaaaaggtactccacccgtgaaaacggagccatcgtcatct
ggtggacgcgtcaccgaggaggaaatcagggctgtattgatgcagagaacaccactcacc
acaaatgatcttgtatctaaatttaagggaagactcaaatcttcagaggaaaagaccgct
ttttcgaatattctaaggagaatttcaaagataaagaaggggaacggaaccagcagctat
atagtactgaaagagcgatga
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