Pyrus communis (pear): 137728040
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Entry
137728040 CDS
T10779
Name
(RefSeq) CLIP-associated protein-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcox03036
]
137728040
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pcox04812
]
137728040
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
137728040
Cytoskeleton proteins [BR:
pcox04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
137728040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
HEAT_2
TOR1L1_N
Cnd1
Adaptin_N
INTS1_R4
TPR_TTI1_C
MMS19_C
HEAT_DAAF5
HEAT_Maestro
MMS19_N
UTP20
Dopey_N
Npa1
TPR_TTI1_N
Motif
Other DBs
NCBI-GeneID:
137728040
NCBI-ProteinID:
XP_068323018
LinkDB
All DBs
Position
3:complement(19296434..19305919)
Genome browser
AA seq
1438 aa
AA seq
DB search
MEEALELARAKDTKERMAGVERLHQLLEASRKSLTSSEVTSLVDCCLDLLKDNNFRVSQG
ALQALASAAVLSGDHLKLHFNALVPAVVERLGDGKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSYAWAHKSWRVREEFARTVTSAIGLFASTELPLQRTILPPILQMLSDPNPGVRDAAI
ACIEEMYTQAGPQFRDELQRHHLPMSMLKDINARLERIEPKIRSSDGLSAVEAKPVNLNH
KKSSPKAKSSSREASLFGAETDASEKSVDPIKVYSEKELIREIEKIASTLVPEKDWSIRI
AAMQRIEGLVYGGAADYQCFRGLLKQLVGPLSTQLSDRRSSIVKQACHLLCFLSKELLGD
FEACAEMFIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKSDRNAILR
ARCCDYALLILEYWADAPEIQRSADLYEDLIRCCVADAMSEVRSTARMCYRMFSKTWPER
SRRLFSLFDPVIQRLINEEDGGIHRRHGSPSVRDRGVSHTPQPSAASNLPGYGTSAIVAM
DRSSSLSSGNSISSGLLLSQAKSLGKGTERSLESVLHASKQKVSAIESMLRGLDLSEKHN
STLQSSSLDLGVDPPSSRDPPFPAAAPASNHLSNSLMADSTTSSIHKSSGRNGGLVLSDI
ITQIQASKDSGKSSYRSNLSAEAVPTVSSYAMRRASERTQERGSIEDNNDTREARRFMNS
QIDRHYDTSHRDGNFRDSHSNHVPNFQRPLLRKNVTGRMSAGRRRSFDESQLSLREMSSY
VEGPASLNDALSEGLSPSSDWNARVAAFNYLRSLLQQGPRGIQEVIQNFEKVMKLFFQHL
DDPHHKVAQAALSTLADIIPSCRKPFESYMERILPHVFSRLIDPKELVRQPCSTTLDIVS
KTYSVDSLLPALLRSLDEQRSPKAKLAVIEFSISSFNKHSLNPEGSGNSGILKLWLSKLA
PLAHEKNTKLKEAAITCIISVYSHFDSVAVLNFILSLSVEEQNSLRRALKQYTPRIEVDL
MNFLQNKKERQRLKSYDPSDVVGTSSEEGYVSASKKSHFFGRYSAGSVDSDGGRKWSSTQ
ESAMVTGPVGQAASDDTRENLYQNFETGSNTDVLNSKSKDMSYTMNSVSQNLGSWTSPLD
KVDGRVNLEGLSTSCLDVNGLMCLDHLGVAETIGHDSEAPTDLDPNHYTLTAVKVNSAPE
SGPSIPQILHLIGNGSEESPTASKRGALQQLIDASIANDHSVWTKYFNQILTVILEVLDD
FESSIRELSLSLIVEMLKNQKDAMEDSVEIVIEKLLHVTKDVVPKVSNESEHCLSIVLAQ
YDPFRCLSVIVPLLVTEDEKTLVTCINCLTKLVGRLSQEELMAQLPSFLPALFEAFGNQS
ADVRKTVVFCLVDIYIMLGKAFLPYLEGLNSMQLRLVTIYANRISQARTATSIDTNHD
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgctggagcttgcgcgtgccaaggacaccaaggagcgcatggcgggagtg
gagcgcctgcatcagcttctggaagcgtccagaaagagcctgacttcgtcggaggtgacg
tcgctcgtcgactgctgcttggatcttctcaaggacaacaacttcagagtctcccagggc
gctctgcaggccctcgcctccgccgctgtgctctccggcgaccacctcaagctccatttc
aatgcgcttgttcccgccgtcgttgagcgtttgggcgatggcaaacagcccgtccgcgac
gccgctaggaggctcctgcttactctcatggaggtttcttctccgacaataatcgttgaa
agagcaggatcttatgcctgggcgcacaaaagctggagagttagagaagagtttgcacga
acggtcacctcagcaattggactttttgcatcaactgaacttccacttcagcggactata
cttcctccgattctacagatgttaagtgatccaaaccctggtgtaagggatgcagctata
gcgtgcattgaggagatgtatacacaggcaggacctcaattccgtgatgaacttcagagg
caccaccttccaatgtctatgctgaaggatattaatgcgaggttagagaggattgaacct
aagattcgctcgtcagatggacttagtgctgtagaagcgaagcctgtgaaccttaaccac
aagaaaagtagtccaaaggccaagagttcctcgagggaggcgtctctctttggagcggaa
actgatgcttctgaaaaatccgtagaccccattaaagtttattcagaaaaggaactaata
agggaaattgagaaaattgcttctacccttgtaccagagaaagactggtcaattcgcatt
gctgcaatgcagagaattgaaggacttgtatatggaggtgctgctgactaccaatgtttc
cggggactcctgaagcaacttgttgggcctctgagcacacaattatctgatcgaaggtcc
agcatagtgaaacaggcttgccatctgttatgctttttgtcaaaggagttattaggagat
tttgaggcatgtgcggagatgttcattcctgttcttttcaagctggttgtgattactgta
cttgtaattgcagagtctgcagataactgcataaaaacgatgttgcgtaattgtaaagtt
gctcgcgtgcttccacgaattgctgattgtgcaaagagcgaccgtaatgcaatacttcgt
gcaagatgctgtgattatgcactgttgatactagagtattgggctgatgcacctgaaata
cagcgctcagcggatttgtatgaagatctaataaggtgttgcgtggccgatgcaatgagt
gaggtccgatcaactgcaagaatgtgctatagaatgttctcaaaaacgtggccagagcgt
tcccgacggttattttcgctatttgatcctgttattcaaaggttaatcaatgaagaggat
gggggcatacataggcgtcatggttctccttccgttcgtgataggggtgtgtcacatact
ccgcagccttctgctgcctcaaatttgcctggatatggaacttcggctattgttgcaatg
gatagaagttcaagtttatcatctggcaattctatctcatcgggactacttctgtcgcaa
gctaagtcacttggtaaaggtactgaacgtagtctggaaagtgtgttgcatgcaagcaaa
cagaaggtcagtgcaattgaaagcatgcttagaggtttggatttgtctgagaaacataat
tcaactctccagtcatcaagcctggatctaggagttgaccctccatcatctcgtgatcca
ccattccctgctgctgccccagcttctaatcatctctcaaactctttaatggcagattca
actacctcaagtatccataaaagtagtggccgcaatggtggattggttttgtccgatatc
attacacaaattcaagcttccaaagattctggtaaatcgtcatatcgcagtaatctatca
gcagaagctgtgccaactgtttcttcatacgcaatgaggagagcttctgagagaactcaa
gaaagaggttcgatcgaagacaacaatgacactagggaggctagacggtttatgaactct
caaatcgataggcattatgacacgtctcacagagatgggaactttagggattcacatagc
aatcatgtgccgaattttcaaaggccactcttaagaaagaatgtgactggaaggatgtct
gcaggcaggaggagaagttttgatgagagccaactctcactcagggaaatgtcaagttat
gtagaaggtcccgcatctctaaatgatgctctgagtgagggactgagtccatcgtctgac
tggaatgctagggttgctgcatttaattatctacgatctttgctgcagcaaggcccaagg
ggaattcaagaagtgattcagaattttgagaaagtaatgaagttgtttttccaacacttg
gatgatccccaccataaagttgctcaggcagcactttcaacactagcagatattattcca
tcttgccgtaagccctttgaaagttacatggaaaggatcctaccccacgttttctcacgg
ttaattgacccaaaggagttagttaggcagccgtgttcgacaacgttagatattgttagc
aaaacgtacagtgtagattccctcttgcctgctttgctccgttcattagatgaacagcga
tcaccaaaggccaaactagctgttattgagttttccattagttcttttaacaagcattca
ctgaatcctgaaggttctggtaatagtggcatccttaaattatggctttctaagttggcg
ccattggcccatgagaaaaatactaaactaaaggaggcagccattacgtgcataatatct
gtttactctcactttgattcagtagctgtcttgaattttattcttagtttgtcagttgaa
gaacaaaattctttgagaagggccctgaaacagtacactcctcgcattgaagtggacctt
atgaacttcttgcaaaataagaaagagcgacagcgtctcaagtcttatgatccatctgat
gtagttggaacatcttctgaagaaggatatgttagcgcctcaaagaaaagtcacttcttt
gggaggtattctgctggttcagttgatagtgatggtggcaggaagtggagttcaacccaa
gaatcagccatggtcaccggccctgttggccaagcagcttctgatgacacacgggagaac
ttgtatcagaattttgagactggttccaacactgatgttctcaattcaaaatccaaagat
atgtcttacactatgaattccgtgagtcagaacttgggctcctggactagcccactggat
aaagttgatggtagagtaaatttagaaggcttgtctacttcttgcctggacgttaatggt
cttatgtgcttggaccatttaggggttgctgagactattgggcatgatagtgaagctccc
accgacttggaccctaatcattatacacttacagctgtgaaggttaattctgcaccagaa
tcaggtcccagcattcctcaaatacttcatctgattggcaatggaagtgaggaaagccct
acagcaagcaaacgtggtgcacttcaacaattaattgatgcttccatagctaatgaccac
tctgtttggaccaagtacttcaatcagattttgactgttatacttgaggtgttggatgat
tttgagtcctcgattcgggaactctctctttccttgattgttgaaatgcttaagaaccag
aaagatgcaatggaagattctgttgagatcgtaattgagaagctgcttcatgttacgaag
gatgtcgttcccaaggtttcaaatgaatccgagcactgcttgagtatcgttttagcccag
tatgatccattcagatgtctaagcgttattgtccctctgttggtaactgaagatgagaaa
actcttgttacttgcatcaactgtttgacaaagcttgtgggccggctttcacaagaggaa
ctgatggctcagttgccatcatttttgcctgcacttttcgaagcgtttggaaaccagagt
gctgacgttcgcaagactgttgtcttctgtttagtcgatatatacatcatgctcggaaaa
gcattcttgccatacctggagggactcaacagcatgcagttacggctggtgactatttac
gccaacagaatttcacaggccaggacggccacgtcaattgacaccaaccatgattag
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