Pyrus communis (pear): 137728413
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Entry
137728413 CDS
T10779
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox00040
Pentose and glucuronate interconversions
pcox01100
Metabolic pathways
Module
pcox_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
137728413
Enzymes [BR:
pcox01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
137728413
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
137728413
NCBI-ProteinID:
XP_068323309
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Position
3:complement(21227404..21230138)
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AA seq
400 aa
AA seq
DB search
MDMGSIIYSLGRVFLLFLLLVWETEGRDQAKYFDVRKYGAVDDGKTDNSLAFLDAWKEAC
QWKGTARVVVPIGTFKLYPVIFSGPCNGPIAFLIKGTLRATTNPSTFSAHSWINFRYIDQ
LTVTGGGTLDGQGASAWHLNNCKTNPQCKALPVSMSFDFITNARVEYIRSYDSKNAHFKI
FGCHNMGFRKIKISAPADSPNTDGIKIGSSYRIRIARSTIATGDDCVAMVHGSRKIHISK
VVCGPGHGISIGSLGGNDKEDDVVGVTVKNCTFLGTDNGVRIKTWASPYTSKASNFTFQD
IFMDDVLNPISIDQEYCPNPPCNQQTSSNVQISDVTYKNIWGSSSSEVAVSFRCSKTWPC
KNVLLDSIKMSHSNPRGRLRSFCKYAKGSSYGSQSPPSCL
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggatatgggttcgatcatatattctctaggtagggtcttcttgttattcttgttgttg
gtatgggaaacagaaggtcgtgatcaagccaagtatttcgacgtgaggaaatatggagct
gttgatgatgggaaaactgataacagtctggcatttctggatgcatggaaagaagcatgt
caatggaaaggaacggcaagggttgtggttcccataggaacattcaagttgtatccagtg
atattctcaggtccatgcaatggtccgattgcctttctgattaagggtactttgagggct
acgactaatccatcaacatttagtgctcacagttggataaacttccggtacatcgatcag
ttgacagtgaccggaggcggtaccttggacggccaaggagcctcggcttggcatcttaac
aactgcaaaaccaatccccaatgcaaggctcttcctgtttcaatgagttttgatttcatc
acaaacgcaagagtcgaatacataagatcatacgacagcaaaaatgcacatttcaaaatt
ttcggatgccacaatatgggctttaggaaaatcaaaatctcagctccggctgacagtccg
aacaccgatggcattaagattggaagctcataccgaatcagaatcgcacgctctacgatc
gccacgggcgatgactgtgtcgcgatggtgcacggaagtaggaaaatccacatttctaaa
gttgtgtgcggtcccgggcatggaatcagcatcggaagcctaggagggaatgacaaagaa
gacgatgtggtcggagtgactgtgaaaaactgcacctttttggggacggataatggtgtg
aggatcaaaacttgggcttctccttataccagcaaggcttcaaattttacattccaagac
attttcatggatgacgttctgaatcctattagcatcgatcaagaatattgccccaaccct
ccttgcaatcaacagacttcttcgaatgtgcaaatcagcgacgttacgtacaaaaatata
tggggaagttcgtcgtcggaagtagccgtcagtttccgatgcagcaaaacctggccatgc
aagaacgtactgctggacagcatcaaaatgtcccattctaatcccagaggacgtttgcgt
tccttctgcaagtatgccaaaggctcctcttatggctcacaaagccctccatcttgttta
tag
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