Pyrus communis (pear): 137728575
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Entry
137728575 CDS
T10779
Name
(RefSeq) LOW QUALITY PROTEIN: protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
137728575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137728575
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
137728575
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_At5g56370
LRR_4
Rod_C
Motif
Other DBs
NCBI-GeneID:
137728575
NCBI-ProteinID:
XP_068323425
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All DBs
Position
3:28474371..28482427
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AA seq
510 aa
AA seq
DB search
MGLFRLWGTLWVQLPVWGRRGFALSLGRDVSLAVFGFAAEYPLLEELRLKRMTVTDESLE
MLGVCFGGFKALSLVSCDGCGIDGLAAIATHSKNLIELDIQENQIDEKSGSWLGYFPETF
TSLEILNFASLISDVDFDALERLVKRCISLRLLKVNKYVTLEQLQRLLTNSPQLVELGTG
SFAVQEIAACQNSQLLRVFSNCANLNTLSGLWEATTLYLPVVYPVDTNLTFLNLSYAAAL
QSWDLAELVAYCPRLRRLWVLDTVEDQGLKAVGSNCPLLEELRVFPSDPDGDGIIRGVTE
SGFVAMSHGCRKLRYILYFCWQMTNAAVSTVSQNCPDITHFRLCRMIPGQPDFITNEPMD
EAFGAVVKNCTKLQRLSVSGLLTDHAFEYIGMYAKNLEKLSVAFAGKSDLGMQCVLKGCP
KLKKLEIRDCPFGNEVFLSDIXKXESMRSLWMSACKVTINACRLLASQMPRLNVEVIKDE
GDDDRVADKVYVYRSVAGPRRDAPPFVLTF
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgttcaggctctgggggacactgtgggtccaactgcccgtttggggacgacgc
ggctttgctctcagtcttggcagagacgtttcacttgcggtctttgggttcgccgccgag
tacccgctgctggaggagctccggctgaagaggatgacggtgactgatgagagtctggag
atgttgggtgtttgttttggtgggttcaaagctctctcgcttgtcagctgtgatgggtgc
ggcattgatggccttgccgccatcgccactcactccaagaatttgattgaactcgacatc
caggagaatcaaattgatgagaaaagtggcagttggttaggttatttccctgaaaccttc
acgtctttggagatactgaactttgcaagcctgatttccgacgtcgattttgatgctctt
gagaggcttgtaaaaaggtgcatatcattaaggctgttgaaggttaataaatatgtaacc
ttggagcaactgcagaggcttcttaccaattctcctcaacttgtggagctcggaaccggc
tcatttgccgtgcaagagatcgcagcctgtcagaattcacaactcttaagagtatttagc
aattgcgcgaatttaaacaccctctctggattatgggaagcaaccactctttatctccca
gttgtatatcctgttgatacaaatcttactttcttgaatttgagttatgctgctgctttg
caaagttgggaccttgctgagcttgttgcttattgcccacgtctccggcgcctttgggta
ctggacacagtggaagaccaagggttgaaggctgttggatctaactgtcctttgcttgag
gaactccgtgttttcccttctgatcctgacggtgatggtattatccgtggggtgactgaa
tctgggtttgttgccatgtctcatggctgcagaaaactccgttatatcctctacttctgt
tggcagatgactaatgccgctgtgtcaaccgtttcacaaaattgcccggacatcacccac
tttcgtctctgcagaatgatcccggggcaaccagatttcataacgaacgagcctatggat
gaggcttttggtgcagttgtgaagaattgcactaaactccaacggctttcagtgtcaggt
ttattgactgaccatgccttcgaatacattgggatgtatgctaagaatttggaaaagctt
tcagtagctttcgctggaaaaagtgatttggggatgcagtgtgtgctgaaaggttgtcca
aagctcaagaaacttgagataagggactgcccgtttgggaatgaagtttttctctcagat
atatagaagtaagaatccatgagatcactttggatgtcagcctgcaaggtgacaataaac
gcctgccggttattggcaagtcagatgccgagattgaatgttgaggtaataaaggatgaa
ggggatgatgaccgtgtggctgataaagtttatgtttaccgttctgttgctgggccaaga
agggatgccccgccttttgttctcactttctga
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