Pyrus communis (pear): 137728706
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Entry
137728706 CDS
T10779
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
pcox Pyrus communis (pear)
Pathway
pcox03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137728706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcox03009
]
137728706
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
137728706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_TEP1_2nd
Beta-prop_NOL10_N
Beta-prop_EIPR1
DUF7165
Beta-prop_IFT140_1st
Mala_s_1-like
Beta-prop_SPT8
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
137728706
NCBI-ProteinID:
XP_068323550
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Position
3:complement(20937591..20939539)
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AA seq
563 aa
AA seq
DB search
MSLISQNVPSAFKANKTKRDDDGVTDEPPSLLQGNEDNGDEEVTDLDIVRTKKRKKARKE
DDEKVAVEQKEKEQLEDSLFGAINSPLEFGKGDEEEVGDGADLFFVDRSASGVLSVDEED
GELSEEETQERKPVWVDEEEEKAKINIAKVNRLRKLRKEEEESLISGSDYVLRLRAQHAK
LNPGTEWAQLDRHLLESSYSDDESSDEENRVGVARGYKGVESVDDLLRMNEDLVVKSSSK
LLPGLLEYSALLNANAEEPSNGPINSVQFHRNGQLLLAAGLDRRLRFFQIDGKRNAKIES
IFLDDCPIRKASFLPDGSQVIIAGRRNFFYSFDLVKAKVDKIGPLVGREEKSLEFFEVSP
DSSTIAFVGNEGYILLVSSKTKELIRTLKMNGTVRSLAFTNDGKQLLSSGGDGQVYHWDL
RTGACIRKAVDEGCINGTSLCTSPTGTLFAAGSDSGIVNIYNREDFLGGKRKPIKTIENL
TTKVDFLKFNGDAQILAICSSMKKDSLKLIHVPSFTVFSNWPPPRRSIHYPRCLDFSPGG
GFMAVGNAAGKVLLYKLHHYHHA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaatatcgcagaatgttccgtcggcttttaaagccaacaagactaaaagggat
gatgatggtgttactgacgagccgccttcgcttctgcaaggaaacgaagacaatggggat
gaagaagtgactgatttggatattgtgaggacgaagaaaagaaagaaagcccgtaaggaa
gatgatgagaaagtggcagtggagcaaaaagaaaaggagcagctggaggactcattgttt
ggagccattaattccccacttgagtttggaaagggggatgaagaagaagttggagatgga
gcggatttgttctttgtggaccgttctgccagtggtgtgctttcagttgatgaagaggat
ggagagttatcggaagaggaaactcaggaaaggaaacctgtgtgggtagatgaggaagag
gagaaggccaaaataaatattgctaaagttaataggttaaggaagctgaggaaggaggag
gaggagagtttgatttcgggttcagattacgtgttgagattgagggctcagcatgctaag
ctgaacccaggcacagaatgggctcaacttgatcgacacttgctggagagtagttattct
gatgatgaatcgtcggatgaagagaatcgggtaggagtggcccgtggctacaagggtgta
gaatctgttgatgatctccttcgaatgaatgaggatcttgttgtgaagagcagttcaaag
ttgttgcctggacttcttgaatattcagcacttctaaatgcaaatgcagaggaaccttct
aatggtccgataaactcagtgcagttccatagaaacgggcagttgcttcttgctgctggg
ttggatcgaaggcttaggttttttcaaattgatggcaagcggaatgctaaaatagaaagc
atcttccttgatgattgtcccattcgaaaggcgtcttttttgcctgatgggtctcaggtt
attatagctggaaggaggaacttcttttacagctttgacttagtgaaggccaaagtagat
aaaattggacccctggttggtagagaggagaaaagcttggaattttttgaagtttcccct
gattctagtacaattgcttttgtgggcaatgaaggctatatcctgttggtttcctctaaa
acgaaggaattgatccgaacactaaagatgaatggaaccgttcgttctttagcttttacc
aatgatgggaagcaactgttgagctccggcggagatggacaggtttaccactgggatctg
agaactggggcttgcatccgtaaggctgttgatgaaggttgcataaatggaacatctctt
tgtacatctccaactggaacactgtttgctgctggttcagacagcggcattgtcaacatt
tacaatagagaggattttttggggggcaaaagaaaacccatcaagaccatcgagaatctt
acaacgaaagtagactttctcaagttcaatggtgatgctcaaatactggccatttgttcg
agcatgaagaaggatagcttgaagttgatacatgttccatcatttactgttttctctaac
tggcctccaccgagaaggtccatacattatccccgctgtttggatttcagtcccggtgga
ggtttcatggctgtaggaaatgctgctggaaaagtgttgttgtacaagttgcatcactac
catcacgcatag
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