KEGG   Pyrus communis (pear): 137729130
Entry
137729130         CDS       T10779                                 
Name
(RefSeq) cullin-4-like
  KO
K10609  cullin 4
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03420  Nucleotide excision repair
pcox04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    137729130
  09124 Replication and repair
   03420 Nucleotide excision repair
    137729130
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pcox04121]
    137729130
   03400 DNA repair and recombination proteins [BR:pcox03400]
    137729130
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pcox04147]
    137729130
Ubiquitin system [BR:pcox04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     137729130
DNA repair and recombination proteins [BR:pcox03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      137729130
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      137729130
Exosome [BR:pcox04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   137729130
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 137729130
NCBI-ProteinID: XP_068324072
LinkDB
Position
3:complement(25629189..25637157)
AA seq 831 aa
MSLMSHPNKRSSAINHSGTSSSSSLNPSSAGPPMKKAKSQAVACSLDPSKNGLHHHHHHH
PHTHPSQDPDNDAVFDPSSMSLDEDLKPDDPSPRGIAANLSRKKAQPPQPSTKKLVIKLV
KAKPTLPTNFEEETWAKLKSAISAIFLKKPDSCDLEKLYQAVNDLCLHKMGGSLYQRIEK
ECERHIAAALQSLVGQSPDLVVFLSLVERCWQDLCDQMLMIRGIALYLDRTYVKQTPNVR
SLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIEKERLGEAVARTLLNHLLKMFTALGIYS
ESFEKPFLECTSEFYAAEGMKYMQQADVPDYLKHVEIRLHEEHERCLIYLDASTRKPLVA
TAEKQLLDRHIPAILDKGFTLLMDGNRIEDLQRMHTLFSRVNALESLRQALSSYIRRTGQ
GIIMDEEKDKEMVASLLEFKASLDTIWEESFFKNEVFCNTIKDAFEHLINLRQNRPAELI
AKFLDEKLRAGNKGTSEEELEGMLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASI
DAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFRQSSQARTKLPSGIEMSVHVL
TTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLKADFPKGKKE
LAVSLFQTVVLMLFNDAEKLSLEDIKDSTGIEDKELRRTLQSLACGKVRVLQKFPKGRDV
DDGDTFTFNDTFIAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAAIVRIMKTRK
VLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq 2496 nt   +upstreamnt  +downstreamnt
atgagtttgatgtctcaccccaacaaacgctcctcagcgatcaaccacagcggcacctcc
tcctcctcctctctcaacccttcttccgccggcccacccatgaaaaaggccaagtcgcag
gcggtggcctgttccctcgatcccagcaaaaatggcctccaccaccatcaccaccaccac
cctcacactcacccgtcccaggaccccgataacgacgccgtattcgacccctcttccatg
tccctcgacgaagatctcaagcccgacgacccctctccccgaggcatcgccgccaattta
tcccgcaaaaaggcgcagccccctcagccctctaccaagaagcttgtcatcaagctcgtc
aaagctaaacccacgttacccacgaattttgaagaggaaacatgggcaaagctgaaatca
gctatttctgctatattcttaaagaaacctgattcttgtgacttggagaagctttatcag
gctgttaatgatctctgcctgcacaagatgggaggaagtctttatcaacgaattgagaag
gagtgtgaaagacacatagctgcagcgctgcaatctttggttggccaaagcccagattta
gtggtttttttatcacttgttgagagatgctggcaggacctttgtgaccagatgttaatg
attcgcggtatagccttatatcttgataggacatacgtgaaacaaactccaaatgttcgt
tcgttgtgggacatggggttgcagcttttccgcaaacacctttctctgtctccagaagtt
gagcacaaaactgtcactggccttttaagaatgatcgagaaagaaagattaggtgaagca
gtggctaggactctgcttaaccatcttttgaagatgtttacagctttaggaatttactca
gaaagctttgagaagccatttcttgagtgtacttctgaattttatgctgctgaaggcatg
aaatatatgcagcaggcagatgttccggattacttgaagcatgtggagataaggttgcat
gaagaacatgaaagatgtttaatctacctggatgcaagtacacgaaagcctttagttgca
acagcggaaaaacagcttttagatcgccatataccagccattctcgacaagggtttcaca
ttgctgatggatgggaatcgcattgaggaccttcaaaggatgcacactcttttttccaga
gtcaatgcccttgaatcactaaggcaagcgcttagctcatacatccggaggacagggcag
ggcattatcatggatgaagagaaagataaagaaatggttgcttctcttttggaatttaag
gcttctcttgacactatatgggaagaaagctttttcaagaatgaagtattctgcaacacc
ataaaggatgccttcgagcatttaattaatctccgacagaaccgacctgctgagctgata
gcaaagtttttggacgagaagcttcgtgctgggaataagggtacatctgaagaggaattg
gagggaatgcttgacaaagtcttggttttattcaggtttatacagggtaaggacgtgttt
gaagcattttataagaaagatcttgcaaaaaggcttcttttgggaaagagtgcttctatt
gacgcagagaagtctatgatttccaagctgaagaccgagtgtggcagtcagtttacaaac
aaactcgaaggaatgtttaaggatattgaactctcaaaagagataaacgagtccttcaga
caatcatcccaggccaggacaaaactcccatcagggattgagatgagtgttcatgtcctt
acaactgggtactggccaacttatcctcccatggatgttagacttcctcatgaattgaat
gtataccaggatatcttcaaggagttttacctaagcaagtacagtggtaggcgtttaatg
tggcaaaattcattaggtcactgtgtcttgaaagcagattttcctaaaggcaaaaaggag
cttgcagtttctctgtttcagactgttgtcttgatgctgtttaatgatgctgagaagcta
agccttgaagacattaaggattcaactggcattgaggataaggaactcagaagaactctg
cagtcccttgcatgtggaaaagttcgtgtcctacaaaagtttcccaaagggagagacgtg
gatgatggtgatacatttacattcaatgacactttcattgctcctctctaccgcataaag
gtgaatgcgatccaaatgaaggaaacagtggaggagaacacgagcaccactgaaagagta
ttccaagaccgccaatatcaggttgatgctgctattgttcggataatgaaaactaggaag
gtgctgagtcacactcttctgataacagaactgttccaacagcttaaatttccgataaag
ccggcggatttgaagaaaaggattgaaagcctgattgaccgggagtatctagaacgggac
aagaacaaccctcaaatttacaactacctagcataa

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