Pyrus communis (pear): 137729194
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Entry
137729194 CDS
T10779
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
137729194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pcox04121
]
137729194
Enzymes [BR:
pcox01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
137729194
Ubiquitin system [BR:
pcox04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
137729194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
137729194
NCBI-ProteinID:
XP_068324151
LinkDB
All DBs
Position
3:9813851..9819321
Genome browser
AA seq
1096 aa
AA seq
DB search
MEITPSPPPSADRDVPTDTVKTSSSQENEASAAAVTVKCDDEEEEEDVCRICRNTGDADN
PLQYPCACSGSIKFVHQDCLMQWLNHSNARQCEVCKHAFSFSPVYAENAPARLPFQEFVV
GMAMKTCHVLQFLLRLSFVLSVWLLIIPFITFWIWRLAFVRSFGEAQRLFLSHLSTTVIL
TDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGQDADREDEGERNGAHAARRAPGQAN
RNFVGDVNGEDAGAQGIAGAGQMIRRNAENVAARWEMQAARLEAHVEQMFDGLDDADGAE
DVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFSIGRIILYHLFWIFSAATGP
VLSTVMPLTESALSLANVTLKNAVTAVTNVSSESQQSGMVGQVEEILKANMSGLNEVSNN
VSLPLSADFLKGATLGTSRLSDVTTLAVGYMFVFSLVFFYLGIVALIRYTRGESLTMGRF
YGIASMAETISSLFRQFLAAMRHLMTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKS
MSHRVQFFSASPLASSLVHWVVGIIYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPF
RDLIDDPVHKHARRVLLSVVVYGSLIVMLVFLPVKLAMRMAPSIFPLDISVSDPFTEIPA
DMLLFQICIPFATEHFKLRTTIKSLLCYWFTAVGWALGLTDFLLPRSEDNGAQENGNAEP
GRQDRVQVQLGVQDQALVALPGADDPNGVILASGDSNVAEEYDTDEQSDPERYSFVLRIV
LLLAVAWMTLLVFNSALIVVPTSLGRAIFNVIPFLPITHGIKCNDLYAFIIGSYIIWTAV
AGIRYSIEHIRTKRVAVLLGQIWKWCAIVVKSSALLSIWIFVIPVLIGLLFELLVIVPMR
VPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMMPLMDETWRAKFARVREDGFSRLQGL
WVLREIVFPIIIKLLTALCVPYVLARGLFPVLGYPLVVNSAVYRFAWLGCLCFSLLCFCA
RRFHVWFTNLHNSIRDDRYLIGRRLHNFGEAVEEKQNEAGTSSEVQDSNYETNRLIRYDR
EVDIGLRLRRVNQVDD
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggagatcaccccgtccccgccgccgtccgctgaccgggacgtcccaaccgacaccgtc
aagacgtcgtcgtctcaggagaacgaagcgagcgcggcggcggtgacggtcaagtgcgac
gatgaggaagaggaggaggacgtgtgccggatctgtagaaacacgggcgacgccgataac
ccgctgcagtacccgtgcgcttgtagcggaagcatcaagtttgtgcaccaggattgcctc
atgcagtggcttaatcacagcaatgctcgccaatgcgaggtttgcaagcatgcgttttcc
ttctctcctgtatatgctgagaatgcccctgcaaggcttccttttcaagagtttgtagtt
gggatggcaatgaaaacttgccatgttctgcaattccttctgcgccttagttttgtgctt
tctgtttggcttctcattataccttttatcacattttggatatggcggttggcttttgtg
aggagttttggtgaagcccagagattattccttagtcatttatccactacagtcatcctt
actgattgtctgcatgggttcctactttctgctagcattgtgtttatttttcttggggcc
acttctctgagggattacttcaggcatttacgtgagcttggaggacaggatgctgacaga
gaagatgaaggggaaagaaatggtgcccatgctgcaaggagagctcctggacaagctaac
aggaactttgttggtgatgtgaatggggaagatgctggagcacaggggatcgccggagca
ggtcaaatgattaggaggaatgcagaaaatgttgctgctcggtgggagatgcaggcagct
cgtcttgaagctcatgtggagcagatgtttgatggtctggatgatgctgatggggccgag
gatgtaccgtttgatgagcttgtcggcatgcagggacctgtatttcatttagttgaaaat
gcattcactgttctggccagcaatatgatattccttggtgtagtaatctttgtgcctttc
tcaataggtcggattatactctatcatttgttttggattttctccgcagctactggtcca
gtattgtcaacagtcatgccacttacagaatcagccctttccttagcaaatgtaacattg
aagaatgcagtaacagcggtaacgaatgtatcatctgaaagccaacaaagtggtatggtt
ggacaggttgaagagatcctgaaagcgaacatgagtggactaaatgaggtttcaaacaat
gtaagcttaccactatcagcagacttcttgaaaggggcaacacttgggacatcaaggctg
tctgatgttacaactcttgccgttggatacatgtttgtgttttccctagtgttcttctac
ctgggcattgttgctttgattcggtacactaggggtgaatcattgactatgggaaggttc
tatggtattgcttctatggcagagacaatttcatctctcttcaggcagttcctggcagca
atgaggcatttgatgactatgattaaggttgcttttcttctagtcattgaactgggggta
tttcccttgatgtgtggatggtggctagatgtttgtactataaggatgttcgggaagtcc
atgtctcacagggttcaattcttctcagcttctcccttagccagttcattggtccattgg
gtggttggaattatatacatgctacaaatcagcatatttgtcagtcttcttcgaggggtt
ctgcgtaatggagttctttatttccttagagatccagctgatcctaactacaatccattc
cgtgatcttattgatgatccggtgcacaaacatgctcgcagggtcctcttatctgttgtg
gtgtatgggagtttaattgtgatgctggtgtttttaccggttaaactagctatgcggatg
gcaccttccattttccctcttgacatctcggtgtccgacccgtttactgaaattcctgcg
gacatgcttctttttcaaatatgcattccattcgccactgagcatttcaaattacggaca
acgattaaatccctcctctgttattggtttacggcagttggctgggctcttggtttaact
gatttcttactgcccagatctgaggacaatggtgcacaggaaaatggaaatgcagagcca
ggaagacaggatagagtacaggttcaactgggggtacaggatcaggctttggtggcactt
ccaggtgctgatgatccaaatggagttattcttgcatcaggagactcaaatgttgcagaa
gagtatgatacagatgaacaatctgatcctgaaaggtacagctttgtgcttcgcattgta
cttttgttggcggtggcttggatgacgttacttgtcttcaactctgccttgatagtcgta
ccaacctcacttggaagggcaattttcaatgtcattccttttctccctataacacatgga
atcaagtgcaatgatttgtatgctttcatcattggaagctacataatatggactgctgta
gctggaattagatattccatcgagcatattagaaccaaaagggttgcagttctgttgggc
cagatctggaagtggtgtgccattgttgtcaagagttctgcgcttttgtcaatatggatt
tttgtcattccagtattgattgggctgctctttgagcttttggtgatcgttccaatgcgt
gtgcctgttgatgagagcccggtattcctgctttaccaggactgggctttaggccttatt
tttctcaagatatggaccagactggttatgttggatcacatgatgccactgatggatgaa
acctggcgagcaaagtttgcaagggtgagggaagacgggttctccaggctgcaaggtctt
tgggtgcttcgtgaaatcgtattcccaatcattataaagttgttgactgccctgtgcgtg
ccttatgtacttgccagagggctatttcctgttctcggttacccattagtggtgaactca
gcagtttatcggtttgcctggctgggatgcctttgctttagcctgttgtgcttttgcgcc
aggagattccatgtctggttcacaaaccttcacaactcaatacgtgacgaccggtaccta
attggtcgaaggcttcataactttggggaagccgtcgaagagaagcaaaacgaagcaggg
acatcctcggaagtgcaggactctaactacgagaccaacaggttaatccgatacgatcga
gaagttgatataggactccgactaaggcgtgttaaccaagtcgatgactaa
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