Pyrus communis (pear): 137729249
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Entry
137729249 CDS
T10779
Name
(RefSeq) uncharacterized protein
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137729249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137729249
Spliceosome [BR:
pcox03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
137729249
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
137729249
NCBI-ProteinID:
XP_068324220
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Position
3:complement(30119830..30124060)
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AA seq
562 aa
AA seq
DB search
MSSKREHEGNASVNTEGFELHPKRQKLNEHSSPSPASEGTLLPGFNYGDVDDEDNHRRPP
VSGFNGDGGDNQKGVQNGGQVGELEDDDDDDDDDLEQGLYQRRGREIEVRRDCPYLDTVN
RQVLDFDFEKFCSLSLSNLNVYACLVCGKYYQGRGKKSHAYTHSLEAGHHVYINLRTEKV
YCLPDGYEISDPSLDDIRHVLNPRFTEEQVEQIDKNKQWSRTLDGSDYLPGMVGLNNIKE
TDFVNVTIQSLMRVTPLRNFFLIPKNYQHCKSPLVHRFGELTRKIWHARNFKGQVSPHEF
LQAVMKASKKRFRIGAQSDPVEFMSWLLNTLHANLRTSKKNSSIIYECFQGELEVVKEIP
NKGIEKIENSDDQNSGAATENKGIVKETYKMPFLMLGLDLPPPPLFKDVMEKNIIPQVPL
FNILKKFDGETVTEVVRPRISRMRYRVTRLPQYLILHMQRFTKNNFFVEKNPTLVNFPVK
NLELKDYIPLSTTKENERLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHV
SETLPQMVALSETYMQIYEQQQ
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagctctaagagggaacatgaaggtaatgctagtgtgaacacggaagggtttgaattg
catccgaagaggcaaaaactgaatgagcattcatcgccgtcacctgcctctgaaggcact
ctacttccgggttttaattacggagacgtggacgacgaggacaaccacagaaggccacct
gtgagtggctttaacggggacggcggcgataatcaaaagggtgtacagaatgggggtcaa
gtaggagaactagaggatgatgatgatgatgatgatgatgaccttgaacaaggactttac
caaaggcggggacgtgaaatcgaggtcaggagggattgcccatatcttgacactgtcaat
cgccaggttttggatttcgattttgagaagttctgctctctgtcactgtcaaatttgaat
gtgtatgcatgcttggtttgtgggaagtattaccaaggcagagggaagaagtcccatgca
tatactcatagccttgaagctgggcaccatgtttatatcaatctccgaacagagaaagtt
tattgccttcccgatggatatgaaataagtgacccatcattggatgatattcgacatgtc
ctaaacccaaggtttactgaagaacaagttgagcagattgacaagaacaagcaatggtct
agaacacttgatggttctgattaccttcctggaatggtggggctcaataacatcaaggag
actgattttgtgaatgtcacgattcagtctttaatgagagtcactcctctaagaaacttt
ttccttatccctaagaattatcaacattgcaagtctccacttgttcatcgatttggggag
ctaacgagaaagatatggcatgcacgaaatttcaaaggacaggtcagcccacacgagttc
ctacaggcagttatgaaagccagtaagaaaaggtttcgaattggagcacagtctgaccca
gtcgaattcatgtcatggctgcttaatacgctgcatgcgaatcttagaacttcaaagaaa
aatagcagcatcatatatgagtgctttcagggggaactggaggttgtgaaggagattcct
aataaaggtattgagaagatagaaaatagtgatgaccagaattcaggtgctgcgactgaa
aataagggcattgtcaaggaaacttacaaaatgcctttcttgatgcttggattggatttg
cccccaccaccgcttttcaaagatgtgatggagaaaaatataataccccaggtcccactc
ttcaacattttgaagaaatttgatggggagactgtcactgaagtggtccgacctcgcata
tcaaggatgaggtatcgagtcaccagattacctcagtatcttattctccacatgcaacgt
tttacaaagaacaatttctttgtggagaagaatcccacactagtgaactttcctgtgaag
aacctcgaattgaaagattacatcccgttgtcaaccaccaaagagaatgagaggctgcgc
tcaaagtatgatctcattgccaacattgtccatgacggaaaacctggtgaaggttcctac
agggtgtttgtacaaagaaaatccgaagagctatggtatgagatgcaggaccttcatgtt
tctgaaacccttcctcaaatggttgcgctgtcagagacatatatgcagatatatgagcag
cagcagtaa
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