Pyrus communis (pear): 137729362
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Entry
137729362 CDS
T10779
Name
(RefSeq) polyadenylate-binding protein 3-like
KO
K13126
polyadenylate-binding protein
Organism
pcox Pyrus communis (pear)
Pathway
pcox03015
mRNA surveillance pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137729362
09123 Folding, sorting and degradation
03018 RNA degradation
137729362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137729362
03041 Spliceosome [BR:
pcox03041
]
137729362
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
137729362
mRNA cycle factors
Stress granule specific factors
137729362
Spliceosome [BR:
pcox03041
]
Complex C
Other components
Complex C specific factors
137729362
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_occluded
RRM_5
RRM_ACIN1
RBD_DEAH11
RRM_3
RRM_Nup35
RRM_7
RRM_11
RRM_YTH1
PABC_AtC3H46
DUF848
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
137729362
NCBI-ProteinID:
XP_068324398
LinkDB
All DBs
Position
3:complement(2879903..2883932)
Genome browser
AA seq
647 aa
AA seq
DB search
MAAAVSGPMAQPMSPAAQQAPPVAAPSVFGNVSLYVGDLDPSVNEAQLYDLFNQMGQIVS
IRVCRDQSRMQSLGYAYVNYGDPQHAANALEVLNFTPINGKPIRIMYSHRDPSIRKSGKA
NVFIKNLDKSIDHKALLDTFSTFGNVLSCKVALDGNGQSKGYGFVQYDNEESAQEAIKKL
NKMLINGKLVYVGLFQRGQERNGQNGSPHFTNVYVKNLSETTTDEDLKKTFGEHGNITSA
VVMRDGSGKSRCFGFVNFEKPEEAAAAIEKLNGSTVSGDKVLFVGRAQRKSEREMELRAK
FEQERLSRFEKLQGANLYLKNLDDTVNDEKLKELFSEFGTITSCKVMLDHQGVSKGSGFV
AFSTPEEANKALAEMSGKMIGRKPLYVAVAQRKEERKARLQARFTQIRAPGGMSPLPSGI
PAYHPGAPRLAPQQLYFGQGSGILPHQPAGYGFQQQLVPGMRPGVGPNFIMPYQLQRQGQ
PGQRMGVRRGGNFQHVQQQQLLHRNSNQGLRYMGNARNGVDPSLAPQSLVGPMMPLPLDG
AGLPMSPNDIHRSGPLPTSTLASALASATPENQRLMLGEQLYPLVERIEPENTAKVTGML
LEMDQTEVLHLIESPDALKNKVAEAMDVLRTAATKSDVTDQLGALDE
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggtatcgggtccgatggctcaaccaatgtctccggccgctcaacaggcg
ccgcctgttgcggctccatcggttttcgggaacgtgtcgctgtacgtgggcgatctggac
ccgagtgtgaacgaagcgcagctgtacgatctgttcaaccaaatggggcagatcgtttcg
attcgggtctgtcgggatcagagccgaatgcaatccctcggctatgcctacgttaattac
ggcgatcctcagcacgccgctaatgccctggaggttttgaattttactcctatcaatggg
aaacccatcaggattatgtactctcatcgtgatccaagcattcggaagagcggaaaggcc
aatgtgttcattaagaacctggacaaaagtattgatcataaggcgttgttggacactttt
tcaacctttggcaacgtactttcttgcaaggttgcacttgatggcaacggtcaatcgaaa
gggtatgggttcgtacagtatgacaatgaggaatctgcgcaggaggcaatcaagaagctg
aacaaaatgctgataaatggaaaactggtttatgttggattgtttcaacgaggccaggaa
aggaatgggcaaaatggatcaccacatttcactaatgtttatgtgaagaatttgtcagag
acaactacagatgaagaccttaagaaaacttttggtgagcatggtaacattactagtgcg
gttgttatgagggatggttctggaaagtctagatgttttggttttgttaactttgagaag
ccagaagaagctgctgctgcaattgagaagttgaatgggagcaccgttagtggtgacaag
gttttgtttgtcgggagggctcaaaggaaatccgagagggagatggagttgagagctaag
tttgaacaggaaagactcagtagatttgagaagctacaaggtgctaatttatatctcaaa
aatcttgatgacacagtaaatgatgaaaaactaaaggagctattttctgaatttggaaca
ataacatcatgcaaggtcatgcttgatcatcaaggggtgagcaagggttctggatttgtt
gcattttctactccggaagaagccaataaagccttggccgagatgagtggcaagatgatt
ggacggaagcctttgtatgttgccgtggcccaacgcaaagaagagcgcaaggctcgatta
caggcacgttttacccaaatccgagcaccaggtgggatgtcaccattgccatcaggaatt
cctgcatatcatcctggggcacctagacttgccccgcaacaactgtattttggtcaaggt
tctggcattctaccccatcagcctgctggttatggcttccagcagcagctagtgcctggc
atgcgcccgggcgttggtccaaacttcattatgccataccaacttcagaggcaaggtcaa
cctgggcagcggatgggtgtacggcgaggtgggaacttccaacatgtgcagcagcagcag
ttactgcaccgtaattccaatcaaggcttgagatacatgggcaatgcacggaatggagtg
gacccatctttggctcctcaaagtcttgtgggtccaatgatgcctttgccacttgatggt
gcagggctgcctatgtctcctaatgatatccatcgttctgggccgttgccaacatcaaca
cttgcttctgctttagcttctgctaccccagagaatcagcgtttgatgctgggtgaacaa
ctatatccacttgttgagcggatagagcctgagaacacggctaaggtgactgggatgttg
ctagagatggaccagacggaagttctccatctgatcgagtctccagatgccttgaagaac
aaggtagctgaggcaatggatgttctgcgtacagctgcaacgaagtctgacgttactgat
cagcttggtgcattggatgaatga
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