Pyrus communis (pear): 137729526
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Entry
137729526 CDS
T10779
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137729526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pcox03036
]
137729526
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
137729526
SWR1 complex
137729526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
137729526
NCBI-ProteinID:
XP_068324600
LinkDB
All DBs
Position
3:complement(22128865..22141558)
Genome browser
AA seq
2160 aa
AA seq
DB search
MASKGPRSKLDHEPRPKRQKALETASEPRRPKAHWDHVLEEMIWLSKDFESERKWKLAQA
KKVALRASKGMLDQATRGERKLKEEEQRLKKIALNISKDVKKFWLKIEKLVLYKHQMELD
EKKKKALDKQLEFLLGQTERYSTMLAENLGDSYKPVQQYPTQGQPSIQFKEMDKNDTNKS
TELNAEPDTERADIDVDDDDYDVQSEDRTEDDENTIEEDEALFTEQERKEELAALQNEVD
LPLGELLKQYPTEKDGLSVSPESSTEKGEDATEMISGDDGAEMTSVEEEHGMSPGKNGDG
AELISLGKKDDMSPGKDEGGKEMTSVEEERVKQDEDGTKMTSVGEEKGMCSEKVEDAAEI
TSVGEERGEKSDLFVSDITEKINSDVVTGRRCVQSNGGLSISESHLSEIEINEDKNHSEA
PVQLAKGQMRYDFNDEHEDGDFILAAGEEQDDETTLSEEEELEKADTNDRMDEIALLQKE
SEVPLQELLARYKKDLNSDEVADGESEYGSALSEDFVDSSSLEDVEPKQDDYMDEDVDSG
EHQPALDSPTEEHSESITKISEGGKDSENRLEDAAAAARSAQPTGNTFSTTNVRTKFPFL
LKFPLREYQHIGLDWLVTMYEKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIV
VPTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWLKPNSFHICITTYRLVIQDSK
VFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLM
PHVFQSHQEFKDWFSNPISGMVEGQERVNKEVLDRLHNVLRPFILRRLKRDVEKQLPMKH
EHVIYCRLSKRQRNLYEDFIASSETQATLASANFFGMISIIMQLRKVCNHPDLFEGRPIV
SSYDMGGIYTQLSSSVCSILLPGPFSAVDLKGLGFLLTHLDFTMNSWESDEVKALATPSN
SIKERVELINLEDIGGLKHRKKLHGTNIFEDIHKAIMEERLRQAKEHAAAIAWWNSLRCD
RKPIYSTSLRELVTVRHPVFDIHRHKANPISYMHSSKLADIVLSPVERFQEMIDLVESFL
FAIPAARAPPPVCWCNKSVSSVFLHPAYKQKCSEYLSPLLSPFRPAIVRRQVYFPDRRLI
QFDCGKLQELAVLLRKLKSEGHRALIFTQMTKMLDTLEAFINLYGYTYMRLDGSTPPEER
QTLMQRFNTNPKIFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQT
REVNIYRLISQSTIEENILKKANQKRALDDLVIQSGGYNTEFFKKLDPVELFSGLRALPV
KNMQKEKNHNATEVSLSNADLEAALKHAEDEADYMALKKVEQEEAVDNQEFTEEAIVRLE
DDELVNEDDVKIDEPADRGGCVASSSKENGGDPNEGRAHTVTCREDDVDMMADVKQMAAA
AAAAGQEISSFGNQLRPIDRYAIRFLELWDPIIDKKAVESQARFEETEWELDRIEKYKEE
MEAEIDEDEEPLVYETWDADFATEAYRQQVEALAQIQLEELEYEAKLKEDEAEENGDSMK
NEVPIDPKPKTKKKSKKAKFKSLKKQSLASELKPLKGELQAEPMSIDEDSLSHEMVTYSD
TESPRSSVQRKRKKAEVIPVGEEKSSKKKSKKLKKSTLEICPTELDTNLTTMDHDEVTES
KPCESMVEFDHKPASRSKMGGKISITSMPVKRILLIKPEKLKKGNIWSRDCIPSPDFWLS
QEDAMLCAVVHEYGPHWSLVSDVLYGMTAGGFYRGRYRHPIHCCERFRELIQRYVLSTPD
NPNYEKVNNIGSGKALLKVTEDNIRMLLNVAADQPNTEFLIQKHFTALLSAVWKVTSHKD
RRKNLPSSQNGLYFGGSIFSPSNQKSQTPMMERTERMKLTNFGHGTKLVAAALNDASNRQ
GTKLVPAALNDASSRRDNDTVFRPNLGKDSSIESERLDITLEFQGAKDDTMDELPSVLNL
SISDSDRFPSLNKATEDHHLRKSSNVNLAENRFRTATRTCNEDAMGWASSVFPTNDIRSR
SMSKLPTTGKHKLVFSDSVRPSKSKIRKSSVEHGEMRNFVSEQVLPPFPMAAPLNPNPRF
DLNTPIDEDAGIYDLESNSFSCLDESLLEMETFGVLPHEYVPGLIGGLDDEQLPEYTDIG
NT seq
6483 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaaaggtccaaggtccaagcttgatcatgaacccagacctaagcgccaaaag
gcccttgaaactgcaagtgaacctcgtcggccaaaagctcactgggatcatgttttggaa
gagatgatatggctttcaaaggatttcgagtcagagagaaaatggaaattagctcaggcg
aagaaagttgctttaagagccagcaagggcatgctagatcaggctacaaggggagaaagg
aaattgaaggaggaagagcaacggctaaagaagattgcactcaatatatcgaaggatgtg
aagaaattctggctgaaaatagaaaagctggtgctttacaagcatcagatggaacttgat
gagaaaaagaaaaaggcactcgataagcagcttgagttccttctaggtcaaactgagagg
tactcaacaatgttggcagaaaatcttggggacagctacaagcctgttcagcaatatcct
acccaaggtcaaccaagtatccaattcaaagagatggacaaaaatgatactaacaaatca
accgaattgaatgccgaacctgacacagaaagagcagacattgacgttgatgatgatgat
tatgacgtacagtctgaagatagaactgaggatgatgagaacactattgaggaagacgag
gctctttttactgaacaagaaaggaaggaagagttggctgctttacagaatgaagtagat
cttccacttggggagctactcaaacaatatcctacggagaaagatggactttcggttagc
ccagaaagtagtacagaaaagggtgaagatgctacagaaatgatatcaggagacgatgga
gcagaaatgacctcagtagaggaagagcatgggatgtctcccggtaagaatggggatggt
gcagaactgatctcgttggggaaaaaggatgatatgtctccagggaaggatgaaggtggc
aaagaaatgacttcggtggaggaagagcgtgttaaacaggatgaagatggcacaaaaatg
acctcagttggagaagagaagggtatgtgttcagaaaaggttgaagatgccgcagaaata
acctccgtgggggaggaacgtggtgaaaaaagcgatctttttgtgtccgatataaccgag
aaaatcaactcagatgttgtcactggtcgtcgttgtgtgcaaagtaacggtggtttgtcc
atttcagaaagccatttatcagagattgagataaatgaagataaaaatcattcagaagcg
cctgtacagcttgccaaaggacagatgcgatatgattttaatgatgaacatgaagatggt
gacttcattcttgctgctggagaagaacaggatgatgagacaaccttatcagaggaggag
gaactggaaaaagcagataccaatgaccgcatggatgagattgccttactgcagaaggag
agtgaagttcctttacaggaactgcttgcaaggtataaaaaggatttaaacagtgatgaa
gttgcagatggtgaatctgaatatggctctgctttatcagaggattttgtggattcttca
tctcttgaagatgttgaaccaaagcaagatgattatatggatgaagatgttgactctggt
gaacaccagccagctcttgattctccaactgaagaacacagtgaaagtataactaagatt
tcagaagggggaaaagacagtgaaaacagacttgaggatgcagctgctgccgctagatct
gcacagccaactggaaacaccttctccacaaccaatgtccgcacaaagttcccctttctt
cttaagttccctctacgtgagtatcagcatattggcttggattggcttgtaacgatgtat
gagaaaagactgaatgggattctagccgacgagatgggacttgggaagacaatcatgaca
attgctttgcttgcacacctagcatgtgaaaagggaatatggggtcctcatcttattgtg
gtcccaactagtgtaatgcttaattgggagactgagtttcttaaatggtgtccagctttc
aaaatcctaacttattttggaagtgctaaagagcgcaagttgaaaaggcaaggctggttg
aaaccaaactcatttcatatatgcataacaacatacagactggttattcaagattcaaaa
gttttcaagcgtaagaagtggaagtacttgattttagatgaagcccatctgattaaaaat
tggaagtctcagaggtggcagactcttttgaacttcaattccaaacggcgcattttgtta
actggtactcctctacaaaatgatctcatggaactttggtctctaatgcatttcttgatg
ccccatgtatttcagtctcatcaggaattcaaggattggttctctaatccaatatcaggg
atggttgaggggcaagaaagagtaaataaagaagttcttgatcgcctgcataatgttctt
cgtccattcattctccgtcgtttaaaacgagatgtggagaagcagcttcctatgaaacat
gagcatgtcatatactgtagactctccaagaggcagcgtaacttgtatgaagacttcatt
gctagctccgaaacacaagcaactcttgcaagtgcaaatttttttggaatgataagtatt
ataatgcaacttcgtaaagtatgcaatcatcccgacttatttgaaggtcgtccgattgtc
agttcctatgatatggggggtatttacacacaattgagttcttcagtatgttcaattctt
ttacctggacccttttctgcagtagaccttaagggtttagggtttttacttactcattta
gattttacaatgaattcttgggagagtgatgaagttaaagctcttgctacaccatcaaat
tcaatcaaggagcgtgtagaactgattaatcttgaagatattggtggacttaaacatcgc
aagaagttgcatggtaccaatatttttgaagacattcataaggcaattatggaggagaga
ctaagacaagcaaaggaacatgctgcagctattgcatggtggaattccttgaggtgcgac
aggaaacccatatactcaacaagcctaagggagcttgttacagtaagacatcctgttttt
gatattcaccgccacaaggctaatcctatatcctacatgcactcctcaaagcttgctgat
atagtcctttcaccagtggagcgcttccaggaaatgattgacctggttgaaagcttcttg
tttgcaatccccgccgcacgagcgccaccacctgtatgctggtgcaataagtctgtaagt
tctgtgtttctgcatccagcttataagcagaaatgctctgaatacttgtcaccactttta
tcaccgttcagacctgcaattgttcgaaggcaagtatattttcctgacaggcgacttata
caatttgactgtggtaaattgcaagagcttgcagttttacttagaaaactaaagtcagaa
ggtcacagagcactaatattcactcagatgaccaagatgcttgataccttggaggctttc
atcaatctgtatggttacacatatatgcgtttagatggatccactccgccagaggagagg
cagactttaatgcagcggtttaacacgaatccaaaaatttttcttttcatattgtcaacc
cgtagtgggggtgtgggtattaacctagttggggcagacactgttatcttttatgatagt
gactggaatcctgctatggaccaacaagctcaagatcgatgccaccgtattggacagaca
cgtgaagtaaatatttatcggttgatcagtcagagtaccattgaagaaaatatcctgaag
aaggcaaatcagaagcgtgcacttgatgatctagttatacagagtgggggctacaatact
gaattcttcaaaaagcttgaccctgtggagcttttctctggtcttagggcacttcccgtg
aagaatatgcaaaaggagaaaaatcacaacgcaactgaggtttctctgtctaatgctgat
cttgaagctgctctaaagcatgcagaagatgaagctgattacatggcattaaagaaagtt
gagcaggaagaagctgtggacaaccaagaatttacagaagaagccattgtgagattggaa
gatgatgaattagtaaatgaggacgatgtgaagattgatgaacctgcagatcggggtgga
tgcgtggcgtcttcaagcaaagaaaatgggggtgatcctaatgaaggaagagctcatact
gttacttgtagagaagatgatgtggacatgatggctgatgtcaaacagatggctgcggct
gctgcagctgcaggacaagaaatctcatcatttggcaatcaattacgtcctatagatagg
tatgcaattcgttttctagaattgtgggacccaattatagacaagaaagcagtggaatct
caggctaggtttgaggagacagaatgggaactggaccgcattgaaaaatacaaggaggaa
atggaagctgagattgatgaagatgaggaacctcttgtatatgaaacatgggatgctgat
tttgcaactgaggcatatcggcagcaggttgaggctttagctcaaattcagttagaggaa
ctggaatacgaagctaaactgaaggaagatgaagcagaggaaaatggtgattctatgaag
aatgaggtgccaattgatcctaaaccaaagactaagaagaaatcgaagaaagccaaattt
aaatctctgaagaaacagtctctagcttctgaactgaaacctttgaaaggagagctacaa
gccgaacctatgtccatagatgaagactctctctctcatgagatggttacctattccgat
acggaatcaccacgttcaagcgtgcagagaaaacgtaagaaagctgaagtcataccagtc
ggcgaagagaagagttcaaagaagaagtctaagaagctcaagaagtctactcttgaaata
tgtcctacggagcttgatactaacctcactactatggatcatgatgaagttacagagtca
aaaccatgtgagagtatggttgagtttgatcataagccagctagcagaagcaaaatggga
gggaaaatttctatcacttccatgcctgtaaagcgaattctactgattaaaccagagaag
ctaaagaaggggaacatttggtctagagactgtattccatcaccagatttttggttgtca
caggaggatgctatgttatgtgctgttgtacatgagtatggtcctcattggagcttggtt
agtgacgtgctttatggaatgaccgctggtgggttttataggggaagatatcgccatccc
atccattgctgtgagagatttagggaactcatccaaagatatgttttgtctacaccggac
aatcctaactatgaaaaagttaacaatataggatctggaaaggctcttctaaaagtgaca
gaggataatattcgaatgttattaaacgttgccgctgaccagcccaatacagagttcctc
attcagaaacacttcactgccttgctttcagctgtctggaaagtgacatcccacaaagac
cgccgaaaaaatctcccatcttcccagaatggtttatattttgggggaagcattttcagc
ccttccaaccaaaagtctcaaactcccatgatggaacgtacagaaagaatgaaattgacc
aatttcggacacggtaccaagttggtagcggctgcactgaatgatgccagcaacagacag
ggtaccaagttggtaccagctgcacttaatgatgccagcagcaggcgtgacaatgacaca
gtctttcgtccaaacctggggaaagattcttcaattgaatcagaacggttggatataact
ctggaatttcagggagcaaaagatgacacaatggatgaattgccatctgttttaaattta
tcaatatctgattctgaccgttttccatcgctaaataaagctactgaagatcatcatctt
aggaaatcaagcaatgtaaatttggctgagaaccgtttcaggaccgcaacaagaacttgt
aatgaagatgccatgggatgggcctcatcggtattcccaacaaatgatatcaggtctcgg
tcaatgtcaaagttaccgaccacgggaaagcacaaacttgtcttctctgattccgttaga
ccttccaaatcgaagatcagaaaaagttcagtggagcatggtgagatgcgtaacttcgtt
tctgagcaggtactcccacctttcccaatggctgcacccctgaatccaaatccgaggttt
gacctgaacacccccatcgatgaggatgctggaatttatgatttggaaagcaattccttt
tcttgccttgacgagtctttgctggaaatggaaacctttggagttctgccacatgaatac
gttcctggcttgattggaggcctcgatgatgaacaattgccagaatataccgacattggg
taa
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