KEGG   Pyrus communis (pear): 137730780
Entry
137730780         CDS       T10779                                 
Name
(RefSeq) THO complex subunit 5B-like
  KO
K13174  THO complex subunit 5
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03013  Nucleocytoplasmic transport
pcox03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137730780
  09122 Translation
   03013 Nucleocytoplasmic transport
    137730780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcox03019]
    137730780
   03041 Spliceosome [BR:pcox03041]
    137730780
Messenger RNA biogenesis [BR:pcox03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     137730780
Spliceosome [BR:pcox03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137730780
SSDB
Motif
Pfam: FmiP_Thoc5 RWD
Other DBs
NCBI-GeneID: 137730780
NCBI-ProteinID: XP_068325844
LinkDB
Position
1:4857992..4861829
AA seq 813 aa
MEDDEIEEGMLVEEDAAPPPPKKPGKSPYEMLQESKFSVEDIVTKMLTIKKEAKPKSELR
ELVTQMFLNFVTLRQANRSILLEEDRVKAETESAKAPVDLTTLQLHNLMYEKSHYVKAIK
ACKDFKSKYPDIELVPEEEFFRDAPADIKEPTLSNDAGHDIMLKRLNFELHQRKELCKHH
EKLEIHKKGLLETIANRKKFLSSLPSHLKSLKKASLPVQNQLGLQHTKKLKQHHAAELLP
PPLYVVYSQFMAQKEAFDEQIELDIVGSVKDAQAFAHKQANKETGISTNVETSREDDALD
EEDDGQRRRKRPKRAPVKQNLEQSGLYQVHPLKIILHIYDDEVSDPKSAKLITLKFEFLL
KLNVVCVGIEGSNDAAENNTLCNLFPDDTGLELPHQSAKLVVGDTLAFDEKRTSRPYKWA
QHLSGIDFLPEVAPLLAAPETPSGDTAKSDAVISGLSLYRQQNRIQTVVRRIRSRRKAQM
ALVEQIESLMKLKWPSVSCESVPWALHTPLCKLHGFSPVGPPPNVASSLSVLDKEQGQEP
MDVDLVGRSGSSKEELESVREDGELPSLVPAASIANVSKLAHHKGASLDHSRRPSLLSKT
PPISKAKSLSYKKLDEDLDLLLDTESDQDEPARVLEEENLASVECFEMAGTSWVDFGVRE
YCLVLTRRVDRDKRNMKLEAKIKISMEYPLRPPYFALSLSTISGENSKESDDSECFNELR
AMEAEVNLHMVKMLPQSEENNILAHQVCCVAMLFDYYMDEASPSSEKRRSTSVVDVGLCK
PVSGQIVARSFRGRDRRKMISWKDMECTSGYPY
NT seq 2442 nt   +upstreamnt  +downstreamnt
atggaagacgacgagatagaggaggggatgctggtggaggaagacgccgctccgccgccg
ccgaagaagccgggaaaatccccgtacgaaatgcttcaggagagcaagttctcagtggag
gacatagtgacgaagatgctcaccatcaaaaaagaagcgaaacctaaatcggagctccgc
gagcttgtcactcagatgttcctcaacttcgtcaccctccgccaggcgaatcgttcgatc
ttgctcgaggaggaccgcgtgaaagcggagacggagagtgcgaaggcgccggtggacttg
acgacgctgcagctccacaatctgatgtacgagaagagccactacgtgaaggccattaaa
gcttgcaaggacttcaagtctaagtacccggacattgagctggtcccggaagaagagttc
tttcgcgacgccccggccgatatcaaggagccgacgctgtcgaatgatgcagggcacgac
attatgctcaagaggctcaatttcgagctccaccagcgcaaggagctctgcaagcatcat
gagaagcttgagattcataagaagggtctgttggagacgattgccaatcggaagaagttc
ttgtccagtcttccttcgcacttaaagtccctaaagaaggcttctttgccggtgcagaac
caattggggcttcagcataccaagaagctcaagcagcatcacgctgcagagttgcttccg
ccgcctctgtatgtagtttactcgcagttcatggcgcagaaggaggcatttgatgaacag
attgagttggatatagtggggagtgtgaaggacgctcaagcttttgcccataagcaagca
aataaggagactggcatttctaccaatgtagagactagtagggaggatgatgcactggat
gaggaagatgatgggcagagaaggagaaagcggccaaagagggctccagtcaagcaaaac
cttgaacagtctggactgtatcaagttcatccgctgaaaatcatccttcatatttatgat
gatgaggtttctgatcccaagtctgcaaaacttatcaccctcaagtttgagtttttgttg
aagttgaatgtggtatgtgttggaattgaaggatccaatgatgcagcggaaaataacacc
ttatgcaacctattcccagatgacactggccttgagcttccccatcagtcagccaagctc
gttgtgggtgatactcttgcatttgatgaaaagagaacttcccgtccgtataagtgggcc
cagcatttatcgggaattgatttcttgcctgaggtggcacctttgcttgctgcccctgaa
actccaagtggtgatacagctaaaagtgatgctgttatatctggtctgtcactttaccgc
cagcagaaccgaatacagacagttgtgcgaagaattcgctctcggagaaaagctcagatg
gctcttgtggaacagattgaatcacttatgaagcttaaatggccgtctgtgtcttgtgaa
agtgttccatgggctttgcatacccctttgtgcaaattgcatggtttttcacctgttggg
cctccacctaatgtggcatcatctttgtctgtcctagataaggagcagggtcaggagcct
atggatgtcgatttggttggacgatctggttcttcgaaggaagagctggagagtgtcaga
gaagatggggaacttccatctttagttccagctgcatccattgccaatgttagtaaactt
gctcaccataaaggagctagtcttgaccactccagacggccgtccttactttcaaaaaca
cctccaatcagcaaggccaaatcgctaagttataagaaactggatgaagatttagatctt
cttctggatacagagagtgatcaggacgaacctgcacgtgtgctagaggaagaaaattta
gcgtctgttgaatgctttgagatggctggaacgtcatgggtggattttggggtcagagaa
tattgtcttgttttaaccaggagagttgacagggataagaggaatatgaagttagaagcc
aagattaagatcagcatggagtatccattaaggcctccctattttgcactcagtcttagc
actatatctggagaaaactctaaagagagcgatgactctgagtgcttcaatgaacttcgt
gcaatggaagcagaggtcaatctgcacatggtgaagatgttacctcaaagtgaagaaaat
aatatcttagctcatcaggtttgttgtgtagcaatgttattcgactattacatggacgaa
gcatccccatcttctgaaaagagacggagcacttctgttgttgatgttggcttgtgcaag
cccgtcagtggtcagattgttgccagatcattcagaggaagggatcgcaggaagatgata
tcctggaaggacatggaatgcacttcaggctatccttactag

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