| Entry |
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| Name |
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7
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| KO |
| K12815 | pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:5.6.2.6] |
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| Organism |
pcox Pyrus communis (pear)
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| Pathway |
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| Brite |
Enzymes [BR:pcox01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137730958
Spliceosome [BR:pcox03041]
Complex C
Other components
Step II factors
137730958
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
4:6906393..6914315
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| AA seq |
1297 aa
MEKRGHTEPIDLDKTTATLEPEANSDGGLFVPGKDRVVFRPPERKSLLGLDVLAIAKREG
SKVNGGFKTPRERGANVVSSMEEDEKSESVISDEKGTDEPTAIRSHSRRRYREISGSETP
RTESTVTEEGKIDDMHENRYSREHLHGDVSSPGGSSHSVRSRTPKYDRDDRGNERRDYKS
RYDRDNRGSERREYQDGSRSERQRYSSNGSDYYRGREGSRYEQEYSGEYGRKRSRYEDSK
RTPGRSDWDDGRWEWEESPRRDNYSNTSRRHQPSPAPMLLGASPDARLVSPWLGGHTPGS
AASPWDHVSPSPAPIRASGYSVKSSSSKYGVRSHQLTFSSESSQSFKDGEEDNLAEEHTY
EITESMRQEMEYNSDRAWYDREEGNTMFDTTDDSSLFYANDASFQKKEAELAKRLVRKDG
TKMSLAQSKKLSQLTADNAQWEDRQLLRSGAVRGTEVQTEFDDEEERRVILLVHDTKPPF
LDGRVVFTKQAEPIMPIKDPTSDMAIISRKGSTLVREIHEKQSQNKSRQRFWELAGSKLG
DILGVEKTAEQIDADTAAVGEDGEIDFKEDAKFAQHMKSGEAVSDFALSKTLSQQRQYLP
IFSVRDELLQVIRENQVIVVVGETGSGKTTQLTQYLYEDGYTVNGIVGCTQPRRVAAMSV
AKRVSEEMDTELGDKVGYAIRFEDVTGPNTIIKYMTDGVLLRETLRDSDLDKYRVVVMDE
AHERSLNTDVLFGILKKVVAQRRDFKLIVTSATLNAQKFSNFFGSVPIFHIPGRTFPVNI
LFSKTPCEDYVEGAVKQAMTIHITSPPGDILIFMTGQDEIEAACYALAERMEQLISSSKK
AVPKLLILPIYSQLPADLQAKIFQKAEDGARKCIVATNIAETSLTVDGIYYVIDTGYGKM
KVYNPRMGMDALQVFPVSRAAADQRAGRAGRTGPGTCYRLYTENAYLNELLPSPVPEIQR
TNLGNVVLLLKSLKVENLLDFDFMDPPPQDNILNSMYQLWVLGALNNVGGLTELGWKMVE
FPLDPPLAKMLLMGDQLGCLDEVLTIVSMLSVPSVFFRPKDRAEESDAAREKFSVPESDH
LTLYNVYQQWKQHQYRGDWCGDHFLHVKGLRKAREVRSQLLEILKTLKIPLTSCWPDTDL
VRKAICSSYFHNSARLKGVGEYVNCRTGMPCHLHPSSALYGMGCTPDYVVYHELILTAKE
YMQCATAVEPQWLAELGPMFFSVKDSDTSMLEHKKRQKEEKTAMEEEMENLRKTQAEEEK
ESKRKEREKRSKQQQQVSMPGLHKGSSTYLRPKKLGL |
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| NT seq |
3894 nt +upstreamnt +downstreamnt
atggagaaacgaggtcacactgaacctattgacctggataagacaacagcgacgttggaa
cctgaggcgaatagcgatgggggattatttgtacctgggaaggatagagttgtttttaga
cctccagagaggaaatctctcctggggttagatgtccttgctattgccaaacgggaaggg
tctaaggtcaacggtggattcaagaccccaagagaaagaggtgctaatgttgtctcatca
atggaggaagacgaaaaatcagagtctgtaatttcggatgaaaaaggtactgatgaaccc
actgctatacgaagtcactctaggaggcgatatcgggaaatatctgggagtgagacacca
cgcacagaaagtactgtaacagaagaaggaaaaattgatgatatgcacgagaatcgctac
tctagggaacatctgcatggagatgtttcgtctcctggtggaagttcccacagcgtcagg
tctcggacccctaagtatgacagggatgatcgtggaaatgagagaagagattacaagagt
agatacgacagggataaccgtggtagtgagagaagagagtatcaggatggtagtaggagt
gaaagacaaagatatagtagtaatggtagcgattattatcgtggaagggaaggtagccga
tatgaacaagaatatagtggagaatatggaagaaagcggagtagatatgaagattcaaag
aggacacctggcagatctgactgggatgatgggagatgggaatgggaggagtcaccacga
cgtgataactactctaataccagtaggcgacatcaaccatcaccggcacctatgctgctt
ggtgcctcacccgatgcacgactagtttccccatggttaggtggccatacacctggttct
gctgcttctccttgggatcatgtctctccctctccagctccaatacgtgcttctggatac
tcagtcaaatcttcaagttcgaaatatggtgtgaggtcccatcaacttactttttcttca
gaaagttcacaatcattcaaggatggggaagaagataatttggccgaagaacacacatac
gagattactgaaagcatgcgtcaagagatggaatacaattctgatcgtgcatggtatgat
agagaagaaggaaacacaatgtttgatacgactgatgactcgtccttgttttatgcaaac
gatgcttcatttcaaaagaaggaagcagagttggcgaaaaggctggtccgaaaagatgga
actaagatgtctcttgctcagagcaaaaagttgtctcaactcactgctgataatgctcag
tgggaggatcgtcaacttttaagatctggtgctgttagaggtaccgaggtgcagactgag
tttgatgatgaagaagaacggagagtcattcttcttgtccatgatacaaagcctcctttc
ctggacggcagggttgtttttaccaaacaagcagagcccataatgcctataaaggatccc
acatcggatatggccataatttcacgcaaagggtctactctggttagggaaattcatgag
aagcaaagtcagaacaaatcacgtcaacgtttctgggagcttgcaggttccaaactgggt
gatatccttggtgttgaaaaaacggcggagcagattgatgcagatactgctgcagtaggt
gaagatggtgaaattgatttcaaagaagatgcgaagttcgcacaacatatgaagagcggg
gaggctgtgagtgattttgcgttgtcaaaaacactctcacagcaacgacaatatttgcct
atattttctgtgcgggatgagttattgcaggtaattcgagaaaatcaggttattgttgtt
gttggagaaactggttctggaaagacaactcaattgacacagtatctttatgaagatgga
tacacagtaaatggtatagtgggttgcacccaaccaaggcgtgtagcagccatgagtgtt
gcaaaaagagtaagtgaagagatggatactgagcttggtgataaagttggctatgctatt
cgttttgaggatgtgactgggccaaataccataataaagtacatgactgatggagtactt
ctgcgcgaaacgctcagagattctgatcttgacaaataccgtgtagttgtcatggacgaa
gcccatgaaaggtcactaaacacagatgtgctgtttggaattttgaaaaaagtggtggcc
caacgtcgtgattttaagctcattgtgacatctgcaactctaaatgctcagaaattttca
aatttctttgggagtgtaccgatttttcacattcctgggagaacgtttcctgtaaatatc
ttgttcagcaaaaccccatgtgaagattatgttgaaggtgcagtgaagcaggccatgaca
attcacatcacgagccctccaggtgatatcctcatcttcatgacaggccaagatgagatt
gaggcagcttgttatgcgcttgccgagcggatggaacaacttatctcatcctccaaaaaa
gcagttccaaaactcttgatactccctatatattcacagttgcctgctgatttgcaagcc
aagatattccaaaaagctgaggatggggcacgtaaatgcattgtagccaccaacattgct
gagacttctttgactgtggatgggatatattacgtgatcgatacaggctatggtaagatg
aaggtatacaatcctcgaatgggtatggatgctcttcaagtgtttcctgttagtcgtgca
gctgctgaccagcgtgctgggcgtgctggtagaactgggcctgggacatgttatcggctg
tacacggagaatgcatatctaaatgaattactgcctagtcctgtgccagagattcagagg
actaaccttggtaatgtggtgttgttgctcaagagtcttaaggttgagaacttgttagac
tttgatttcatggacccacctccccaggacaatattctcaactctatgtaccaattgtgg
gtcttaggtgccctgaacaatgtcggaggcttaactgaactaggctggaaaatggtggag
ttcccattggaccccccgcttgctaagatgttattgatgggtgaccagcttggatgcttg
gatgaggttctgacaattgtgtctatgctttcggtgccatcagtgttttttaggcctaaa
gatagggcagaggagagcgatgctgcaagggagaagttctctgttccagaatctgaccac
ttgacgctgtataatgtctaccagcagtggaaacaacatcagtatcggggggactggtgt
ggagatcattttttgcatgttaaaggcttacgaaaggctagagaggtgaggtcccaactg
ctggagatcctgaagacgctaaaaattcctctaacatcctgttggcccgatactgatctt
gtgagaaaagccatatgctcctcgtacttccacaattctgcaagattgaagggagttggc
gagtatgtgaactgcaggaccgggatgccatgccatttacatccaagcagtgctctttac
ggtatggggtgcactccagattatgtggtttatcatgaactgattttgacggcaaaggag
tacatgcagtgtgccacagcagtggagccgcagtggttggccgagttggggcccatgttc
ttttctgtgaaggattcagatacatcgatgctggagcataagaagagacaaaaggaggag
aaaacagcgatggaggaggaaatggagaacctgaggaagactcaagcggaggaagagaaa
gaaagcaagcggaaggagagggaaaagagatcaaagcagcagcaacaagtctcgatgcca
ggtttgcacaagggatcttctacatatttgaggccaaagaaacttggcttgtaa |
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