Pyrus communis (pear): 137731097
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Entry
137731097 CDS
T10779
Name
(RefSeq) uncharacterized protein isoform X1
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
pcox Pyrus communis (pear)
Pathway
pcox03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
137731097
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcox03009
]
137731097
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
137731097
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_EML_2
Utp12
Beta-prop_WDR36-Utp21_2nd
Beta-prop_ACSF4
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
WD40_Gbeta
CFAP251_N
Beta-prop_HPS5
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_DCAF4
WDR90_beta-prop_4th
PQQ_2
Motif
Other DBs
NCBI-GeneID:
137731097
NCBI-ProteinID:
XP_068326274
LinkDB
All DBs
Position
4:complement(9903533..9909508)
Genome browser
AA seq
629 aa
AA seq
DB search
MASSNIRGLLTAFSPSLDLFAMSSGDGRIKIWDTVKGQVQTEFTDIVASEDTSIYAKRER
GHLSVDYTCMKWFSSERKKKRKRGSSFLVLGTGGGDVLALDVAAGHLKWRVNDCHAGGVS
SISFARNASCLYTAGADGMICQIDSLTGNLSGKFKASTKAISSMSVSSNGNILATAAAQM
KIFNLSDHKKIQKFSGHPGAVRCMIFTEDGKYILSSAVGERYIAVWSIDGGKKQSASVVL
KMEHPAVFVDSRCIDSGEVGDVGLYVLAISEVGMCYFWFGQNIEELRSAKPTKISLSSED
ILSTTYKGALPTIFAAVIQGIVKAASGQVFIAYGSPVKPSFQKILVHSGTDIKLSNSHDG
VLLPMSQSLVKSKKGQNVQNRVIALDRANAEEALHPMPKIFDSHEKKKRHDKLSFDQDEE
MADLDDSRGHAGLVKSKDDMVELEADTAAICMEDRLRALGILSKVDDRMFHSTLNSATFK
SIDLQTNMPHKKMREAVLSLEPSDACKLLGVLVAMWQTRSSSGNNVLPWIYSILVNHSHD
IMSQKSETQMLSSLLKVTKSRGAAIQPLLQLSGRLQLVMAQIDKATHAKTQMSSHKHEMD
ESEDDDEDVNEIHYGEENDDSDISSDDDQ
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcaaacatcagaggtctcctgacggcgttcagtccatctctggacttgttc
gccatgagctccggcgacggtcgaatcaagatttgggatactgtgaagggccaggtccag
actgagtttacagacattgtagcatccgaagatacaagcatatatgctaaacgagaaaga
gggcacctctcagttgattacacttgcatgaaatggttctcttccgaacgaaagaagaag
aggaagcgtggttcctcatttttagttttaggaactggtggcggtgatgttttggcgctt
gacgtggctgcgggtcatttgaagtggagagttaacgattgccatgctggcggtgttagc
tccatatcatttgcaagaaatgcatcatgtctttacacagccggtgctgatgggatgatt
tgtcaaattgattcgttgacaggaaacctgtcagggaagttcaaagcttccacaaaggca
atctcctctatgtctgtttcatcaaatgggaatatattagcaactgcggctgcacaaatg
aagatcttcaatttgtctgaccacaaaaagatacagaagttttctggccatcctggtgct
gttcgctgtatgatcttcactgaagatgggaagtatatcctctcatctgcagttggtgaa
aggtatattgcagtatggagtatagatggtggaaaaaagcagtcagcaagtgttgttctc
aaaatggagcaccctgccgtcttcgtagatagcaggtgcatagacagtggggaagttggt
gatgtaggtctatacgtattagcgatttccgaagttggtatgtgttacttttggtttgga
cagaatattgaagaattacggagtgcgaagcctacaaaaatttcactatcttctgaagac
attttgtctacaacatacaagggtgcattacccacaatatttgctgcggttattcaagga
attgtgaaagctgcttctgggcaggtatttattgcttatgggtcgccagtgaaaccttca
ttccagaaaattttggtgcattctggaacagacataaagttgagtaactcccatgacggg
gttcttctaccaatgagtcagtctcttgtcaaatctaagaaaggacaaaatgtacaaaat
agagttattgcattagatcgagcaaatgcagaagaggcgttgcatccaatgccaaagata
tttgattcacacgagaaaaagaaaagacatgataaattgagttttgaccaagatgaagaa
atggctgatttggatgacagcaggggtcatgctggccttgtgaagagcaaagatgacatg
gtagaacttgaagctgacacagcagcaatttgcatggaggacagactgagagcattaggg
atacttagtaaagtagatgaccgtatgttccactcgacactcaattctgcaacatttaag
agtattgatcttcagacaaatatgccgcataagaagatgagggaagctgtgctatcatta
gaacctagtgacgcatgcaaattattgggggttctggtggccatgtggcaaacaaggtct
agcagtgggaataacgttcttccatggatttacagcatattggtaaatcacagtcatgat
atcatgtcccaaaagtctgaaacccagatgcttagctccttgttgaaggttaccaaatcc
agaggggcagctattcagcccttgttacaattatcaggtcgtttgcaacttgtgatggca
cagattgacaaggcaacccacgcaaaaactcaaatgtcatcacacaagcacgaaatggat
gaaagcgaagatgacgatgaagatgtaaacgaaattcactatggggaagaaaacgatgat
tctgacataagcagtgatgatgatcagtag
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