Pyrus communis (pear): 137731605
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Entry
137731605 CDS
T10779
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137731605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcox03019
]
137731605
03012 Translation factors [BR:
pcox03012
]
137731605
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137731605
Messenger RNA biogenesis [BR:
pcox03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137731605
Translation factors [BR:
pcox03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
137731605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
DEAD
HA2_N
AAA_22
NACHT
Dicer_dimer
nSTAND3
ATPase
AAA_19
T2SSE
ABC_tran
AAA_11
Motif
Other DBs
NCBI-GeneID:
137731605
NCBI-ProteinID:
XP_068326862
LinkDB
All DBs
Position
4:complement(1961354..1969717)
Genome browser
AA seq
1219 aa
AA seq
DB search
MPSVFFLLLLPSPPSLQFPCGPSPSHPKPIASSSKPSLLAMKDRPPSSYGSVYVPPHHRL
RSVISTPNYTSPASIGSKLRENQTAAAALNRRSSTNGALAYYQTQQQQLQQQEQFQKPKL
QHTSAYDDGVSEEGSDREVELPSHPTLSPYSSDIDEWKRKLTMLLRDKMKQELVTREKKD
RRDFDKIAALASRMGLYSYLYSKVAVFSKVPLPNYRFDLDDRRPQREVTLPLGLLRRVES
YLGEFLSQKSRTRESFQNLSFSRSNSSGSIATDEGLFEQPESFASSKGVMEKLLWRRSTQ
LRDKQQAWQESPEGKKMLELRRSLPAYKEKDALLAAISRDQVVIISGETGCGKTTQIPQF
ILESEIEAVRGAVCSIICTQPRRISAMSVSERVASERGEKLGDSVGYKVRLEGMKGRDTR
LLFCTTGILLRRLLVDRNLKGVTHVIVDEIHERGMNEDFLLIVLKDLLPQRPELRLILMS
ATLDSELFSSYFGRAQIIHVPGFTYPVRTHFLEDVLEITGCKLTPYNQIDDYGQEKMWKM
SKQAPRKRKSQIVSVVEDALKAADFKGHSPQTRESLACWNPDSIGFYLIEYLLCNICESD
KPGAILVFMTGWDDINSLKEKLHANPLLGDPSRVLLLACHGSMASTEQRLIFDEPGDGVR
KIVLATNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGR
VQPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLNLGSISEFLSRALQSPELL
AVQNAIEYLKIIGALDENENLTVLGRYLTMLPVEPKLGKMLLVGAIFNCLDPVLTIVSGL
SVRDPFLTPFDKKDLAEAAKSQFSRDNSDHLALVRAYEGWKVAERDFAGYDYCWKNFLSA
QSMKAIDSLRKEFLSLLRDTDLVDTNTTTHNAWSYDEHLVRAVICYGLYPGICSVVHNEK
SFSLKTMEDGQVLLYSNSVNARDSKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVLLLFGG
SFSNGDIDGHLKMLGGYLEFFMKPAIAEMYQCLKEELDELIQIKLLNPRMDTHSYHELLS
AVRLLLSEDQGEGRFVFGRQVLAPSKSKPSVVAAQPALVSRTESGPGGDNSKSQLQTLLT
RAGYNAPTYKTTQLKNSQFRATVEFNGMQIMGHPCNNKKSAEKDAAAEAIQWLVSGTQMG
HEYINHMSMMLKKSKKEHK
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgccctctgttttcttcctcctcctcctcccatctcctccgtctctgcaattcccttgc
gggccgtcgccttcgcatccaaaacccattgcctcctcctccaaaccctcactcctggcg
atgaaggaccggcctccttcctcgtacggctccgtctatgtccctccccaccaccgcctc
cgctccgtcatcagcacccccaattatacctcccctgcttcaatcggctccaagctccgc
gaaaaccagactgctgctgctgctctcaaccggaggagcagcaccaatggtgctctggca
tactaccagactcagcagcagcagctgcagcaacaggagcagtttcagaagcccaagctt
cagcacacttctgcttacgacgacggcgtttccgaggaaggctccgatcgcgaagttgag
ttaccgtcgcatccgacactgagtccttactcatctgatattgatgagtggaaacggaaa
ttaaccatgctgttacgtgacaagatgaagcaagagttggttacgagggagaaaaaagat
agacgtgactttgataaaatagctgctttggcaagcagaatggggctttatagctatctg
tattcgaaagttgctgtgtttagtaaggttccactgccaaactacagatttgacctggat
gataggcgccctcagagagaggtgaccttgcctcttgggttgctgaggagagttgagagc
tatcttggagagttcctttcccagaagtctaggacaagggaaagctttcaaaatctttcc
ttttctagatcaaacagtagtggcagcattgctactgacgaagggctttttgagcaacca
gaatcatttgcgtcgagtaagggtgtgatggaaaaacttctttggcggagaagtacgcag
ctgcgcgataagcaacaagcttggcaggaatctcctgaagggaaaaaaatgcttgaactt
cgtagaagtcttcctgcttataaagagaaggatgcattattggcagcaatttcacgggat
caggtcgttatcatatcaggtgaaactggctgtggcaagactactcaaattccacaattc
attttagaatctgagatagaagctgttcgtggagctgtttgtagtattatatgtacacag
cctagacggatatctgctatgtctgtttctgaaagagttgcttcagagagaggagagaaa
ttgggtgactcggttgggtataaggttcggttagaaggtatgaagggaagggatactcgc
cttctcttttgcaccactggcattttgttgagaagattactagttgatagaaatttgaaa
ggtgtaactcatgtgattgtggatgaaattcatgaacgtggaatgaatgaagattttctg
ctgattgttctcaaggatctccttcctcagcgaccagaactgaggttgattttgatgagt
gcaaccctagattctgaacttttctcatcctactttggtagggctcagataattcatgtt
ccaggttttacatatccagttcggactcattttctggaggatgttctggaaattacggga
tgcaaattaactccatacaatcagattgatgattatggccaagaaaagatgtggaaaatg
agcaaacaggcaccaagaaagaggaaaagccaaattgtttctgttgttgaggatgcactt
aaagcagccgattttaaggggcatagtccacagactcgggagtctctagcatgttggaat
cctgatagtatcggtttttatctgattgagtatctcttgtgcaatatctgtgagagcgac
aagcctggtgccattctagtttttatgactgggtgggatgacatcaattctctgaaggaa
aagttacatgccaatcctctattaggcgatccaagccgagtcttgttactagcatgccat
ggttctatggcaagtactgagcagaggctaatatttgatgagcctggggatggagtgagg
aaaatagtgctggctactaatattgctgagacaagtatcacaattaatgatgttgttttt
gtacttgattgtggaaaggcaaaagagacttcatatgacgcactgaacaatactccttgt
ttgcttccttcctggatttccaaggtttctgctcaacaaagaagaggaagagcaggacgt
gtccagccaggggagtgttatcatctctatcctagatgtgtctatgatgcatttgcagag
tatcaattgccagagattttgaggacacctctgcagtctctctgtctgcaaataaaaagt
ttaaacctcggaagcatttctgagttcttatctagggctctgcagtcaccagaattactc
gcggtgcaaaacgccatagagtatttaaagatcatcggggccttggatgagaatgaaaat
ctgactgttttaggacgctatctaactatgcttcctgttgagccaaaacttggaaagatg
ctcttggtaggtgccatcttcaactgcctggatccggttttgactattgtttctggcctt
agtgtcagagatcctttccttacaccatttgacaagaaagatcttgctgaggctgcaaaa
tctcagttctcccgggacaatagtgatcaccttgcacttgtgcgggcctatgagggctgg
aaggttgctgaaagagactttgctggatatgattattgctggaagaattttctttcagca
caatcgatgaaagctattgattcccttaggaaggagttcctctctttgcttagggatact
gatcttgttgataccaacaccaccactcataatgcatggagttatgatgagcatctcgtc
cgtgcagttatttgctatggcctgtatcctggaatctgctctgttgtgcacaatgagaag
tcattttcgctgaaaaccatggaggatggccaggtgctgctatactcgaactctgtcaat
gctagggattctaaaattccatatccatggctggttttcaatgagaagataaaggtgaac
tctgttttcctacgggattcaacagctgtgtctgactcagtgctcctcctatttggtgga
agtttttctaatggggatattgatggacacttgaaaatgctgggaggatatttggaattc
ttcatgaaacctgctatagcagaaatgtatcaatgcttaaaagaggaacttgatgagtta
attcaaatcaaactactgaaccccaggatggacacacacagttatcatgaactcctttct
gcagtgcggttgctgctctcggaggatcaaggtgaaggtagatttgtatttggccgccag
gtccttgcaccctcaaagtcaaagccgtctgtggtggcagcacagccagccttggtttca
agaactgaaagtggacccgggggtgacaattccaagagtcagctccagacattgctcaca
cgagcaggatataatgcacccacgtacaaaactacgcagctcaagaacagccagttccga
gctacagtggagtttaacggaatgcaaattatgggccacccatgtaacaacaagaagagt
gcagaaaaagatgcggcagcagaggccattcagtggctggtgagtggaacacaaatgggc
catgagtacatcaatcatatgtcaatgatgttgaagaaaagcaaaaaggagcacaaataa
DBGET
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