| Entry |
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| Name |
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
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| KO |
| K12821 | pre-mRNA-processing factor 40 |
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| Organism |
pcox Pyrus communis (pear)
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| Pathway |
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| Brite |
Spliceosome [BR:pcox03041]
Complex A
U1 snRNP components
U1 related factors
137732009
Complex B
137732009
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
1:3965872..3976406
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| AA seq |
1023 aa
MANNPQSSAAQPFRPPPVAPMGPQSFGSSPLQYRPVVPTQQGQQFISPASQQFQPVGQGI
PSPNVGMPASQSQQLQYSQPMQPYPLRPSQPGLPRSSQALPMQYMQTRPITSIPSQSQQP
VPPFNNQMPGMPYSSSYVFTPPTYAQPQNNVNSQFQPMSQVQAHVVSATGQPWVSSGNQG
AAVPSPVHQSSQQSSSTPSTDSALNVPSQAQQSSSDWQEHLAVDGRRYYFNRRTRQSNWE
KPLELMTPMERADASTVWKEYTSADGKKYYYNKVTRESKWTIPEELKLAREQAQRELIQG
THSELNLTSHTPPAVASAETPMGASSVGPSTSSALPVMVSSPVAVTPVSSFSNPSPITPT
GSSVASGAQPSIIGAVGSQPSAVTVSPLPASVSGSSGVPPTSVNTTTNSVSTYETVASQD
ISSSADGTLTQDIEEAKRGMAVAGKVNVTPSEEKTFDDEPLVYANKQEAKTAFKSLLESA
NVQSDWTWEQTMREIITDKRYGALRTLGERKQAFNEYLGQRKKLENEERRMRQKKAREEF
TKMLEESKELTSATRWSKAVSMFENDERFKAVERGRDREDLYESYIVELERKEKEKAAED
HKQNIVEYRKFLESCDFIKVNSQWRKVQDRLEDDERCLRLEKLARLLIFQDYIRDLEKVE
EEQKKLQKEQLRRVERKNRDEFRKLMEEHVADGTLTAKTLWRDYCMKVKDLPPYEAVALN
TSGSTPKELFDDVFEELEKQYHDDKARIKDAMKSGKVTMTSTLAFEEFKVPILEDIGSPP
ISDINFKLVYEELLERAKEKEDKEAKKRQRLADDFYKLLHTIKEITASSNWDDSKQLFEE
TQEYRSVGEDSVSREIFEEYITNLQERAKEKERKREEEKAKKEKEREEKEKRKDKDRKEK
EREREKEKGKERPKKDETDGENVDITDTHGHKEDKKREKDKDRKHRKRHQSSVDDVGSDK
EEKEESKKHRHSSDRKRSRKHTPESDSESRHRRHRREHRDGSRRSGGHDDLEDGELGEDG
EIK |
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| NT seq |
3072 nt +upstreamnt +downstreamnt
atggcgaataaccctcaatcctcagctgcgcagccatttcggcctcccccagttgctccc
atgggtcctcaaagttttggttcatctcctcttcaataccgaccagtggttccaacacag
caaggacagcaatttatttcaccagcttcccaacaatttcagcccgtgggacaaggtatt
ccttctccaaatgttgggatgcctgctagtcaaagtcagcaattacaatattctcaacca
atgcaaccgtatcctctcaggccaagtcagcctggtcttcctcgttcatcacaggcgttg
cctatgcaatacatgcagacgaggcctattacatctatcccatcacagtctcagcaacct
gtcccaccttttaataaccaaatgcctggaatgccttattcttcctcatatgtgttcact
ccgcctacatatgcccagccacaaaataatgtcaattcacagtttcagccgatgtctcaa
gtgcaagcacatgttgtatctgctacaggacagccttgggtgtcctctggtaatcagggt
gcagcagttccttcaccagtacaccagtctagccaacaatcttcaagcactccttccact
gattctgctctaaatgttcctagccaagcacagcaatcttcttcggattggcaagagcat
ttggcggttgatggacgaagatattatttcaacagaaggacaagacaatctaattgggag
aagcctttagaattgatgacaccgatggagagggctgatgcatcaactgtttggaaggag
tatacgtctgcagatgggaaaaagtattattacaacaaggttacaagggagtctaagtgg
acaattccagaggagttgaagttggctcgtgaacaggctcaaagagaactaatccaagga
acacattcagaattgaatttgacttctcatacccctcctgctgttgcttcagctgaaaca
cctatgggagctagttcagttggccccagcacttcttcagccctacctgtgatggtctcg
agccctgttgcagttacacctgtgtcttccttttctaatccttctcctatcacacctact
ggatcatcagttgcttctggtgcacagccttccataattggtgccgttggcagtcaacct
tctgcagttactgtgagtccactgcccgcttctgtttcagggagttccggagttcctcct
acttcggtcaataccactacaaattcagtgagtacttatgaaactgtagcatctcaagat
atttcaagttcagctgatggaactttgactcaagatattgaggaagccaaaagaggtatg
gcagttgctggaaaagtcaatgtgactccttcagaggagaaaacatttgatgacgaacca
ttggtgtatgctaataagcaggaggcaaaaactgcattcaaatcacttctggaatctgca
aatgtccagtccgattggacttgggagcagacaatgagggagatcattactgacaaaaga
tatggcgctttaagaactctaggtgagaggaagcaagcttttaatgagtacttgggtcaa
aggaaaaaactggagaacgaagagaggcgcatgaggcagaaaaaagctcgggaagagttc
acaaaaatgttggaagagtccaaggaacttacatcagcaactagatggagcaaagctgtg
agtatgtttgaaaatgatgaacgattcaaggctgtagaacgaggtagagaccgggaagat
ctttatgagagctacattgtagaactcgaaaggaaggaaaaagaaaaggcagctgaagac
cataagcagaatatagtagagtaccggaaatttctggaatcttgtgactttatcaaggtg
aacagtcagtggcggaaagttcaagatcgcttggaggatgatgagagatgcttgcgcctt
gaaaagcttgccaggttgctcattttccaggactatattcgtgaccttgagaaggtggaa
gaggagcaaaagaagttacagaaggaacaattgaggcgggtagaaaggaaaaaccgcgat
gagttccgcaagctgatggaagaacatgttgccgatggcactcttacagctaaaactctc
tggcgtgattactgtatgaaggttaaagacttgcctccttatgaagctgttgcattgaac
acctctggttcaacaccaaaagaattgtttgatgatgtttttgaagaattagagaaacag
tatcatgacgataaagctaggataaaggatgcaatgaagtcagggaaggttaccatgaca
tccacattggcgtttgaagagtttaaggttcctattctggaagatattggttctccacca
atatcagacattaacttcaagcttgtgtacgaggaattattagagagagccaaggagaag
gaggacaaagaggcaaagaagcgtcaacgacttgctgatgacttctataaacttttgcac
acaatcaaggagataacagcttcttctaattgggacgatagcaaacagctttttgaagaa
acccaagaatacaggtcagttggggaagatagcgttagtagggaaatttttgaggaatac
attacaaacttacaggagagggctaaagagaaggaacgcaagcgtgaggaggaaaaggcc
aaaaaagagaaagaaagagaggagaaagagaaacggaaggataaagatagaaaggagaag
gaaagagaacgtgaaaaagaaaagggaaaggaacgacctaagaaggatgaaacagatggt
gaaaatgtagacataactgatacacacgggcataaagaagataagaagagggagaaagac
aaagatagaaagcaccggaagcggcatcaaagttctgtcgatgatgtaggttccgacaag
gaggagaaagaggagtctaagaaacacagacatagtagtgaccgcaaaagatcaagaaaa
catacccctgaatctgacagtgaaagtcggcatagaaggcataggagagagcatcgggat
ggttcccgtcgaagtggtggacatgacgatcttgaagatggggagcttggtgaagatggg
gaaattaagtaa |
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