Pyrus communis (pear): 137732151
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Entry
137732151 CDS
T10779
Name
(RefSeq) pre-mRNA splicing factor SR-like 1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137732151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137732151
Spliceosome [BR:
pcox03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
137732151
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Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
137732151
NCBI-ProteinID:
XP_068327553
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Position
4:18178642..18183461
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AA seq
423 aa
AA seq
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MEVQTCGKSIDSLLEKVLCMNVLSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTAFCLLYKFFTMKLTIKQMHGLLKHEDSPYIRAVGFLYLRYAADPKTLWNWVEPYIK
DDEEFSPGSNGRMTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRQIVANLEKMKLPTKLSG
ITGEATRHGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTLPPPPYDKASSDD
QRTRRSQSREYSDREYSDRDRGRDRDRNRDRDSDRDRERYKEWERDRDRDRARDGVRDKE
RERERDRERSSDYDRRSRYGERESRRDPYESSRDGGRHSHRSRSRSRSRSRSQSRSLQAG
TTLHSSPQRDVNKDRTSASSNLAILRDLYGDISNQKGDASLDRIPRGDNGGEEVIRLGGS
RWK
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggaggtacagacatgtgggaaatccattgactcattgctcgagaaggtgctttgtatg
aacgttctatcttccgactacttcaaggaactttaccggttaaagacgtaccatgaagtc
attgatgaaatttacaaccaagtagaccatgtcgagccgtggatgaccgggaattgccgc
ggcccgtcaactgccttctgtctgctgtacaagttcttcaccatgaagctcaccattaag
caaatgcacggtcttttaaagcacgaggattcgccctacataagagcggtgggtttcctc
tacttgagatatgctgcagacccaaagactttgtggaattgggttgaaccctatattaaa
gatgacgaggaattttctcctggttccaatggacggatgacaactatgggtgtatatgtg
cgtgatttgctgcttgggcagtactattttgatacccttttcccccgcatccctgttcct
gttatgcggcagattgtagctaatcttgagaagatgaaactccccaccaaactatctggt
attactggagaggctacccgccatggatctgatgacacagctcgtcgcccaccttctgtg
aaagctgctctttcagtttcctttggtcaacgtgctccacatcgtgcttcaacaagggac
tcctcacctgttcgtcgcaccttaccaccaccaccttatgataaagccagtagtgatgat
caaaggacccgtcgcagtcagagccgtgaatattctgacagagaatattcagacagggac
agaggaagggaccgtgatcgcaatcgggatagggacagtgatcgggatcgagaaagatac
aaggaatgggagcgggaccgagacagagacagagcgagagatggagttagggataaggaa
agggagcgagagagggatagagaacgaagttctgattatgatcggaggtccagatatgga
gagagagaaagtcgaagggatccatatgagagtagccgtgatggcggtaggcattctcat
aggagtaggagtcggagccgcagtagaagcaggagtcaaagtcggagtttgcaagcgggc
actacacttcattcgagcccacagagagatgtaaacaaggatagaacatctgcatctagc
aacctggcaatacttagggatctttatggggatatcagtaaccaaaaaggcgatgctagc
ttggataggattcccaggggagataatggtggtgaagaggtgattagacttggtggttct
cgttggaaatag
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