Pyrus communis (pear): 137733610
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Entry
137733610 CDS
T10779
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137733610
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
137733610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_29
Histone_HNS_N
Motif
Other DBs
NCBI-GeneID:
137733610
NCBI-ProteinID:
XP_068328842
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All DBs
Position
5:1448493..1462865
Genome browser
AA seq
1049 aa
AA seq
DB search
MAESRAKRPKITRGEDDYKLGSITKIELHNFMTFGHITCKPAPRLNLVIAPNGAGKSSLV
CAIALGLGGEPQLLGRATSVGAYVKRGEASGYIKITLRGDTEEEHIEIMRKIDTRNKSEW
LYNGRAVPKKDVVEITQRFNVQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLP
IQHRALIEQSKKLKRIEQAVEKNGETLNQLKALNAEQEKDVERVRQREELLAKADTMKKK
LPWLKYDMKKAECMEAMEQEKDAKKKLEKAARTLNQLKEPIEKQKQERVVMESKSTKVVK
NISENANKRMRLLENVNRLGVLIKEKYNEMEELKKQEESRQQRISKAKKDLAAAELELEN
LTPYAAPTDEIARLHAQIVDLEVSAKEKRDKKSEKERFLNQKKLSLNTCLDKLKEMENKN
GKLLQVLKNSGADKIVDAYKWLQEHRHQFNKEVYGPVLLEVNVPDRVHADYLGGHVPNYM
WKSFITQDSRDRDFLVKNLKSFDVPVLNYTGNGTCHREPFQISEQMSALEIYSRLDQVFD
APTAVKEVLISQFGLDRSYIGSRTTDQRADEVSKLGILDFWTPENHYRWSVSRYGGHRSA
SVESVSRSQLFLCGLETGEVESLMSKKGELEESITALQDIVRSLQIEERQAENEAAKFQK
QREEIIRNVQDGKRKQREIENRIAQRKKKLESMEKEDDLDTSMAKLNEQSAKYMIDRFHS
AMEIKSLLAEAVSFKQSYAEKHMMVIEFDAKIKEMEVNIKHHEKVALQASLHHEECKKAE
EDCRQQLLVAKKNAESIAMITPALQKEFLEMPTTIEELEAAIHENISQANSILFLNQNIL
KEYEDRQQKIEEYSAKLEADKTELSRCIAEVDNLKGTWLPTLRSLVAQINETFSRNFQEM
AVAGEVLLDEHEMDFDQYGILIKVKFRQAGQLQVLSAHHQSGGERSVSTILYLVSLQDLT
NCPFRVVDEINQGMDPINERNMFQQLVRAASQPNTPQCFLLTPKLLPDLVYSDECSVLNI
KTGPYASSWANGDWSEGDSYRNILGKRGR
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagtcgcgcaaagcgccccaaaattacaaggggtgaagatgactataagctg
ggaagcataactaagattgagctccataattttatgacctttggtcacataacgtgcaaa
ccggcccctcgtctaaaccttgtaattgcaccaaatggggctggaaagagttctctcgta
tgtgcaatagcactgggtcttggtggtgagcctcagctacttggaagggccaccagtgtt
ggagcatatgtgaagcgtggtgaagcgtccggttatattaaaataaccttgagaggggac
accgaagaggagcatattgaaattatgcgtaagattgatacacgtaacaagtctgaatgg
ttatacaatggaagagcggtgcctaaaaaggatgtggttgaaatcactcaaaggtttaat
gttcaagtcaacaatttaactcaatttttaccacaagatcgtgtctgtgagttcgccaaa
ttaactccagtgcaacttctagaagagactgaaaaggctgtaggagatcctcaattgccg
atccaacatcgtgcacttattgagcaaagcaagaaattgaaaagaattgaacaagccgtt
gaaaaaaatggagaaactttgaatcagttgaaggcactgaatgctgaacaagagaaagat
gttgagcgtgtccgccaaagagaggaacttctcgcaaaggctgataccatgaaaaaaaaa
ttgccatggctgaagtatgatatgaagaaggctgaatgcatggaagctatggagcaggaa
aaggatgcaaaaaagaagttggagaaagcagcaagaactctaaatcaactgaaagaacct
attgaaaaacaaaaacaagagagagtggtgatggagtcgaagagtacaaaagtagtaaaa
aacattagtgaaaatgcaaacaaacgaatgagacttttggaaaatgtgaaccgcttggga
gtgttaataaaagaaaaatacaacgaaatggaagaattgaagaagcaagaagaatctcgt
caacaaaggatctcaaaagcaaaaaaggatctagctgctgctgagctagaacttgaaaat
ctgactccttatgcggcccctacagatgaaattgcgagattgcatgctcaaattgtggat
ctagaagtttctgcaaaggaaaagagggataagaagtcagagaaggaaagatttttaaat
caaaagaaactttccctaaacacctgcctggataagttgaaggagatggaaaataaaaat
ggtaaactcttacaagtattaaaaaattctggagcagataaaatagttgatgcttataaa
tggttgcaagaacatcgtcatcagttcaataaggaggtgtatggccctgttttgcttgag
gttaatgtgccagatcgagttcacgctgactacttgggtggtcatgttcctaattacatg
tggaagtctttcataactcaagattctcgtgaccgggactttttggtaaaaaatctcaag
tcctttgatgttccagttttaaattatacgggaaatggaacttgtcacagagaacccttt
caaatttctgagcagatgagtgcactggagatctattcgcggcttgaccaagtttttgat
gctcctactgctgtgaaggaggttttgattagccaatttggcttggatagatcatatatt
gggtccaggactacggatcagagggctgatgaggtttctaagttagggattttagatttt
tggacccctgagaatcactaccgatggtcagtatcaagatatggtggtcatagatctgcc
agtgtagaatcagtcagtcgttctcaactttttttgtgtggtttggagactggggaagtt
gagtcattgatgtccaaaaaaggggaacttgaagaatctattactgctttacaggatatt
gttagatcacttcagattgaggaaagacaagcagaaaatgaagcagcaaaatttcagaaa
cagagggaggagattatcagaaatgtacaggatgggaagagaaaacaacgtgaaatagaa
aaccgtattgcacaaaggaaaaagaaattagaatctatggagaaggaggatgacctggat
actagtatggcgaagctcaatgaacagtctgcaaaatatatgattgacaggttccattct
gcaatggaaattaagagtctacttgctgaggctgtttctttcaaacaaagttatgctgaa
aagcacatgatggtcattgagtttgatgcaaagattaaagaaatggaggtcaatatcaaa
caccatgaaaaggttgctcttcaagcaagcctgcaccatgaggagtgtaagaaggcagag
gaggattgccgacagcaacttttagttgccaagaagaatgcagaatccattgcgatgatc
actccagcacttcagaaggaatttcttgagatgcctactacaattgaagaattggaagct
gctatacatgaaaatatttctcaagctaattctattctttttctaaatcaaaatatactg
aaagaatatgaagaccgtcagcaaaagattgaagaatattcagcgaaactggaagcagat
aaaacagagcttagtaggtgtatagctgaagtggataatctgaaaggaacttggctccca
acattaagaagtcttgttgctcagataaatgagactttcagtaggaacttccaagagatg
gcggttgcaggggaagttttattggatgagcatgaaatggacttcgaccaatatgggata
cttataaaagtaaaattcaggcaagcggggcagctacaagttctcagtgcccaccatcaa
tccggaggggagcgttcggtttcaactatactttatcttgtttctcttcaagaccttaca
aattgcccatttagggtggttgatgagataaatcaagggatggatccgataaatgaaaga
aatatgttccagcagttagtaagagcagcatctcaaccaaatacaccacaatgtttcttg
cttaccccgaagttgctaccggatctggtttacagtgacgagtgcagcgttttgaacata
aaaactggcccctatgccagttcatgggcgaatggagactggagtgagggcgatagctac
agaaacattcttggaaaaaggggacgctga
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