KEGG   Pyrus communis (pear): 137733711
Entry
137733711         CDS       T10779                                 
Name
(RefSeq) sm-like protein LSM7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
pcox  Pyrus communis (pear)
Pathway
pcox03018  RNA degradation
pcox03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pcox00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137733711
  09123 Folding, sorting and degradation
   03018 RNA degradation
    137733711
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcox03019]
    137733711
   03041 Spliceosome [BR:pcox03041]
    137733711
Messenger RNA biogenesis [BR:pcox03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     137733711
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     137733711
Spliceosome [BR:pcox03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    137733711
SSDB
Motif
Pfam: LSM DUF150_C Hfq
Other DBs
NCBI-GeneID: 137733711
NCBI-ProteinID: XP_068328970
LinkDB
Position
5:511052..514394
AA seq 99 aa
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFLRDSDDPLKT
TDQTRRLGLIVCRGTAVMLVSPTDGTDEIANPFSQPDGA
NT seq 300 nt   +upstreamnt  +downstreamnt
atgtcagggaggaaagaaacagttttggacctggccaagtttgtggacaaaggtgtccaa
gtcaagctcaccggcggcagacaagtgacagggactctgaaaggatatgaccagttgtta
aaccttgtcctagatgaagcagtggagtttctaagagattctgatgatccattgaagacc
actgatcagaccaggcgccttggcctcatagtttgtaggggaaccgctgtaatgcttgtg
tcgccgacagatggtacagatgagatcgccaacccttttagccagccagatggtgcctaa

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