Pyrus communis (pear): 137733722
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Entry
137733722 CDS
T10779
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pcox Pyrus communis (pear)
Pathway
pcox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137733722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcox03400
]
137733722
DNA repair and recombination proteins [BR:
pcox03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
137733722
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
137733722
NCBI-ProteinID:
XP_068328985
LinkDB
All DBs
Position
5:complement(24839810..24847632)
Genome browser
AA seq
1285 aa
AA seq
DB search
MRMKRKRHLYRAKHPFDANPFEALCCGSWQPVEVLSIRRGKMTMSFGNNHPCIIRDKGPF
ANLRVRSRHANMYDCTCFLRPGVDICVLSTPEHTDDSEEGSRDPVMVDARISSIERVPHE
SDRCSCQFYVNFYVNQGPLGTERATLNKEAKLVGIDEIFVFQMIDRDAYENQPYRWECSA
DCPTLPRTKLLLGTFLSDVSWLLVASVMKRVIFDIRSVKTKIVYQILEGDNDRTLLHSDN
YLHAVNFKVDNGLLVPMVVEFVPDDATEADPTPEMDESVPSPSTELVGLRRSKRRIIQPE
RFLACDAPSEIEIGYVRSRPYKVDYSSEDDELYIPLSQLFAKHASHSEEHTEAEQKFRPK
KLKSSKDDNYWKTEEELACKSDDDDDVEYKIKTKSKKVKSGAGKQKRHRDELALVEYRRD
PLTLGHGHRNVNSTPEKGANESDEFPAKYYYHHNRKTKRKNNSDLDDMDFQMKWDGKVST
SRASRVLYRRHHSIRSKRDPNGRTYPRRSLNTGAYKELINSFLKDMDCTNKPDANIMDQW
NEFKAAKNSDQRKETEMPENDDEEEEMSETEMLWKEMELALASAYLQDNEGSNAAAANAS
PPKSDSACRHEFKLNEEIGIICSICGFVSTEIRDVSPPFVQNASVDTYDRKSNVEEPDNK
RAEYEEFNFFHTRTTPDDPETLSEESDNVWALIPELRKKLLFHQKKAFEFLWKNVAGSLE
PSLMERKAKKTGGCVISHTPGAGKTFLIIAFLTSYLKLFPGKRPLVLAPKTTLYTWYKEF
IKWQIPIPVYLIHGRRTYRVFKKKTINFTGGPKPTDDVMHVLDCLEKIQKWHAQPSVLVM
GYTSFLTLMREDSKFVHRKFMAQVLRESPGLVVLDEGHNPRSTKSRLRKGLMKVETDLRI
LLSGTLFQNNFCEYFNTLCLARPKFVNEVLRALDPKYRRIKKGKEKARHLMEARARKLFL
DKIAKKIDSNEEEDQRIQGLNQLRHITNGFIDVYEGGNSDTLPGLQIYTLLMNTTDIQRD
MLDRLQNIMANYKGYPLELELLITLGSIHPWLITTACCAGKFFRPEELMELEQYKYDLHK
GSKVKFVLNLVYQVVRNEKVLIFCHNIAPVRLFLELFERVFGWQRGREVLVLTGDLELFD
RGKVMDKFEEPGGASRVLLASITACAEGISLTAASRVILLDSEWNPSKTKQAIARAFRPG
QQKVVYVYQLLATGTLEEDKYGRTTWKEWVSSMIFSEAFVEDPSRWQAEKIEDDVLREMV
AEDKSKSFHMIMKNEKASTVVRGKD
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaagaggaaaagacatctgtatcgggctaagcatccgttcgatgctaatcct
tttgaggctctttgctgtggttcgtggcaacctgtggaagttctgagcatcaggcgtggt
aagatgaccatgagcttcggaaacaatcatccctgtataatcagggacaaaggtccattc
gcgaacctacgagtcaggtccagacatgcaaatatgtatgattgcacctgctttctgagg
ccgggtgttgatatttgtgtgctgtcaacccctgaacatacagatgattcagaagaaggc
agtcgagatccagtgatggttgatgctcgaataagctcaatcgaaagggtgccgcatgag
tctgatcggtgctcatgccaattctatgtgaacttttatgtgaaccaaggacctcttggt
accgagagagcaacactgaacaaggaagccaaactggttggaattgatgaaattttcgtc
ttccaaatgattgaccgggatgcttatgagaatcaaccctaccgttgggagtgctctgcg
gactgcccaacactaccaagaacaaaattgctcttggggacgttcttatccgatgtttca
tggttacttgtggcgtccgtgatgaagcgggttatatttgatatcagatcagtgaagacc
aaaatcgtgtaccagattttggaaggcgacaatgaccgaactctgttacattctgacaac
tacttgcatgccgtaaatttcaaagtagacaatgggctcctcgtacctatggtagtcgaa
tttgttccagatgatgctaccgaggctgatcctactcctgaaatggatgaaagcgtaccc
tcaccatctactgagcttgttggcctgcgtcgttccaagcgtcgaattatacaacctgag
cgtttccttgcctgtgatgctccatcagagatagagattggctatgttcgaagcaggcca
tataaggtagattacagctcagaagatgatgaattgtatataccgttatcacagctgttt
gccaaacatgcaagtcattcagaagagcacaccgaggcagaacaaaagttccgtcctaag
aagttgaagtccagtaaggatgacaattattggaaaactgaggaagaacttgcttgcaaa
agcgatgatgatgacgacgttgaatacaaaatcaagaccaagtcgaagaaggtgaaatca
ggtgcgggtaagcagaagagacatcgagatgaacttgcccttgttgaatacagaagagac
cctttaacccttggacatggtcatcggaatgtcaacagtactcctgaaaagggtgcaaac
gagagcgatgagtttcctgcgaagtactattaccatcacaatcgtaaaacaaagagaaag
aataattctgacttagatgatatggacttccaaatgaaatgggatggaaaagtatcgact
agcagagctagcagagttttatacagaaggcatcactctattcgttcgaaaagggaccct
aacggaagaacttacccaaggaggagcttaaatactggtgcatacaaggaactgataaat
tcattcttgaaagacatggactgcacaaataagccagacgcaaatattatggaccagtgg
aacgaattcaaggccgcaaagaactctgaccaacggaaggaaactgaaatgccagaaaat
gacgatgaagaggaggaaatgtccgagactgagatgctgtggaaagaaatggaattggca
ttggcatcagcttaccttcaagataatgagggatcaaatgctgctgcggcaaatgcaagt
ccaccaaagtcagactcagcttgccgacatgaatttaaattaaatgaagaaattgggatt
atatgcagcatatgtggttttgtcagcactgaaataagagatgtatctcccccctttgtg
caaaatgccagtgtggacacatatgatagaaagagtaatgtagaagaacccgacaataag
cgagctgagtacgaagaattcaatttcttccacactcgtactactccagatgaccctgag
actttgtcggaagaaagtgacaatgtttgggccctaattcctgaactcagaaagaaatta
ttattccaccagaaaaaggcctttgagtttctatggaaaaatgttgcaggatctttggaa
ccatcactcatggaacgaaaagccaagaaaaccggtggttgcgttatatctcatacccct
ggagccgggaaaacttttctaatcattgcatttcttactagctaccttaagttattcccg
gggaaacggcctctcgtccttgctcccaagacaacactctatacctggtacaaagaattt
atcaaatggcagattcctatacctgtgtatctgattcacggtcgaagaacctacagagtg
ttcaagaagaagaccataaactttacaggaggcccgaagccaacggatgatgtgatgcat
gtgttggattgcctggaaaaaatacagaagtggcatgcacagcctagtgttcttgtcatg
ggttatacctcattcctgacgctgatgcgcgaagactcgaagtttgtgcacagaaaattt
atggcgcaagtgctgcgtgagagtccaggtcttgtagttctagatgaagggcacaatccg
agaagtactaaatccaggctgaggaagggactgatgaaagttgaaacggacttgagaata
ttgctttcgggaactctttttcagaacaacttctgcgaatacttcaacaccctctgcttg
gcaaggccaaagtttgtgaatgaagttttaagggcgttggacccaaaatacagaaggata
aagaaagggaaggaaaaagcgcgccatttgatggaagcccgagcgcgaaagttgttcttg
gataagattgccaagaagattgattccaatgaagaagaagatcagaggatccaaggtcta
aatcaattgaggcatataacaaatgggttcattgatgtgtatgaaggtggaaattcagac
acccttcctggtctacagatttacaccttgttgatgaacactaccgacatacaacgagat
atgttggacagactgcaaaacataatggctaactacaaggggtatcctctggaacttgaa
cttctgataacccttggatcgatacatccatggttaatcacgactgcttgctgcgccggg
aagttttttcgtcctgaggaactgatggagcttgagcagtacaagtatgatctgcacaaa
gggtcaaaagtcaagtttgttttgaaccttgtttaccaagttgtcaggaatgagaaggtt
ttgattttctgtcacaacattgcaccggtgaggctatttctcgaactgtttgaaagggtg
ttcgggtggcagagaggcagagaagttttggttctcacaggggatttggagcttttcgac
cgaggaaaggtgatggacaaatttgaagagcccggcggagcctcgagggtcctgcttgca
tcgatcacagcttgcgccgagggaatcagcttgacagcagcttctcgggtcatcttgttg
gactccgaatggaacccttctaagacaaagcaggcgattgcgcgcgcatttcggcctgga
cagcagaaggtggtgtatgtgtatcagctcttggcaaccggaactcttgaagaagacaag
tatggcaggacaacttggaaggagtgggtgtcaagcatgattttcagtgaggcattcgtg
gaggacccgtcacgctggcaggcagagaagatcgaagacgatgtgctgagagagatggtg
gcagaggacaagagcaaatcgttccatatgatcatgaaaaatgaaaaggcttcaactgtg
gtgagaggtaaggactaa
DBGET
integrated database retrieval system
