Pyrus communis (pear): 137733822
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Entry
137733822 CDS
T10779
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
pcox Pyrus communis (pear)
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcox03009
]
137733822
03036 Chromosome and associated proteins [BR:
pcox03036
]
137733822
Enzymes [BR:
pcox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137733822
Ribosome biogenesis [BR:
pcox03009
]
Eukaryotic type
Pre-60S particles
Helicases
137733822
Chromosome and associated proteins [BR:
pcox03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
137733822
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
YgbB
FlpD
CMS1
Zip
Motif
Other DBs
NCBI-GeneID:
137733822
NCBI-ProteinID:
XP_068329120
LinkDB
All DBs
Position
5:26638891..26643399
Genome browser
AA seq
685 aa
AA seq
DB search
MPSMDVSDYLLAGTTPKDKKEKKKKLKSETLDDAADSPTTEKKSKKESKHKKRKASDDED
RSETSSEMGEPVNVKLPKSEEKSKKKSKKAKVEEPEEEEEKSKEDPNAVLKFRISAPLRA
KLKENGIESLFPIQAMTFDTILDGLDLVGRARTGQGKTLAFVLPVLESLTNGPAKAFRKT
GYGRPPTVIVLLPTRELAKQVFADFEAYGGAVGLAACCVYGGSPYGAQESKLRRGVDVVI
GTPGRIKDHIERGNIDLSTLKVRILDEADEMLRMGFVDDVELILGKVKDVSKVQTLLFSA
TLPSWVKGISSRFLKPDKKTVDLVGNEKMKASTNVRHIVLPCSSSARSQLIPDIIRCYSS
GGRTIIFTETKEAASGLAEALPGARALHGDIQQGQREVTLAGFRSGKFLTLVATNVAARG
LDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNSGVAVMLYDPRRSNFSKIERESGVKFE
HISAPQPLDIAKAVGQDAAEMITKISDGVIPAFKSVAEELLNTSGLSAVDLLAKALAKAA
GYTEIKKRSLLSSMEDHVTVLLEAGKPIYSPSFAFGVLRRFLPEEKVESVKGMALTADGN
GAVFDVASEDLDLFLAGQENAANVSITVLKSLPDLQEKESRNTRFGGGGRFGRGGGGGFR
NDRYSNNRSGGVGGGGGGRGGGNRW
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgatggacgtatccgattatcttctcgcgggaaccactccgaaggataagaag
gagaagaagaagaaattgaaaagcgaaaccctagacgacgccgccgactcgccgaccact
gagaagaagtcgaagaaggagtccaagcacaaaaagcggaaggcttccgatgacgaggac
aggagcgagacgagctccgagatgggcgagcccgtgaatgtgaagctgccgaagagcgaa
gagaagagcaagaagaagtcgaagaaggcgaaggtggaggagccggaggaggaggaggag
aagtccaaagaggatcctaatgcggtgttgaagtttcggatttcggcgccgttgagggcc
aaattgaaggagaatgggatcgaatccttgtttcctattcaggccatgacattcgatacc
attttggatggtttggatttggtcggtcgggctcgaactggacagggtaaaactctagct
tttgtgttgcctgttttagagtccttaacaaatgggcctgcaaaagcatttagaaagact
ggttatggtaggcctccaactgttatcgtgcttttacccactcgggaacttgccaaacag
gttttcgccgattttgaagcttacggtggtgctgtggggctagcagcatgttgtgtgtat
ggtggatctccttacggggctcaagaaagtaagttaaggagaggggtggatgttgttatt
ggaacgcctggccgtataaaggatcatatagagaggggcaatatcgacttgagtaccttg
aaagttaggatccttgacgaagctgatgaaatgctgaggatgggctttgttgatgatgtt
gaacttattctaggcaaggtgaaggatgtaagtaaagttcaaacgctactttttagtgca
accttgccgagttgggtgaaaggcatttcttctaggtttctcaaaccagataagaaaact
gtagatcttgttggtaatgaaaaaatgaaggccagcaccaatgttaggcatattgttctt
ccttgctccagttcagcaaggtcgcaacttattcctgatatcatacgttgttatagcagt
ggaggacgcacaattattttcaccgagacaaaggaagctgcttctggacttgctgaggcg
ttgcctggagcccgagctttgcatggggacatacagcagggccaacgtgaggtcacactt
gctggtttcaggtctggcaagtttttgacattagtcgccacaaatgtggcagcgcgtgga
ctggatatcaacgatgttcaattaattatccagtgtgaacccccacgtgatgtagaagac
tatatccatcgatctggacgcacggggagagcaggaaattctggagttgctgtcatgctt
tatgatccaagaaggtcaaatttttcaaaaatcgagagggaatcgggggtgaaatttgaa
cacatttctgctcctcagccacttgatatagctaaagcagtaggtcaagatgcagcagaa
atgataaccaaaatttctgatggtgtaattcctgctttcaagtctgttgccgaggagcta
cttaacacctctggcctatctgcagtagatctactggctaaagcactagctaaagctgct
ggctacactgagataaagaagagatcacttcttagctctatggaggaccatgtcacagta
cttctcgaggctggaaagcccatttattcaccgtcttttgcttttggggtcttgaggaga
ttcttgcccgaggagaaggttgagtcagtgaagggtatggcactaacagctgatggaaat
ggtgcagtttttgatgtggcatctgaagatttggatttgtttcttgctggtcaggaaaat
gcagctaatgtgagcataacggtgttgaaatcactgcctgatttacaagaaaaagaatca
aggaatacaagatttggcggtggtggaaggtttggccgtggaggtggaggaggttttcga
aatgataggtattccaacaaccgatccggtggtgttggtggtggtggtggtgggagaggt
ggcggcaacagatggtga
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