Pyrus communis (pear): 137734073
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Entry
137734073 CDS
T10779
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
pcox Pyrus communis (pear)
Pathway
pcox03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pcox00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137734073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pcox03041
]
137734073
Spliceosome [BR:
pcox03041
]
Complex A
Other components
Complex A specific factors
137734073
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
zf-CCHC
RRM_5
PHD_4
KH_PNO1_2nd
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
137734073
NCBI-ProteinID:
XP_068329443
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All DBs
Position
5:26116297..26119851
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AA seq
781 aa
AA seq
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MEAALPSNPNLPPPIESLDPHPPPTAETLASDSNGPPQPPPTETLASDAQNPFPNPQAAT
ENGISTDACKKLAITKPLLSENGLTNTNSGNERDGSGGEEETTSRRRRRSRWDPQPESEN
QSGGGETGSGTRKRKSRWADEEPKAIQLPDFMGGIEFDPEIQALNSRLLEISRMLSSGLP
LDDRPEGARSPSPEPIYDNMGIRINTREFRARERLNKERQEIIAQIIKRNPAFKPPADYR
PPKLHKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGRSQQKR
DLKPDPSENEDLHVLVEADTQDALDAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTI
RDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPVKGTTGKKMDDEYQ
NFLAELGGTVPESTTKQTATLALGPGNSTSSNPPWANSTSSTSSASSHPGLGSTGVKPVK
DYDETNLYIGYLPPTLDDDGLIRLFSAFGDIVMAKVIRDRVTGASKGYGFVKYGDVQMAN
NAIASMNGYRLEQRTIAVRVAGKPPQPAGPPASAMPTYPVPQPVASFPSQQFTPGGPLGN
APPTSYAGTPVPWGPPVPPPYAPYAPPPPPPPGSTMYPPPMPGQHMSPYGARYPPPPGAP
PQPMTSSEAQHSYPPPGVQSEHNVSTQSLQTNLYGGSSAPMPPNGQHTYPAASYGYSSYY
NAVPPPPPPPGPVPGSTADQSQNIGNVPWATSAPVHPPASSAEKTTYGADAEYEKFMAEM
K
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgctcttccatcaaaccctaaccttcctcctccaatcgaatccctagatcct
catccccctcctactgccgaaaccctagcctcagattcgaatggcccgcctcaaccgccg
cccactgaaaccctagcttccgatgctcaaaaccccttcccaaatccccaggccgctact
gagaacggtatttcgactgacgcctgcaagaagcttgctattacgaagccgctgttgtcg
gaaaacggattgaccaacaccaatagcggcaacgaaagggatggctcgggcggggaggag
gagacgaccagcaggcgccgccgccgcagccggtgggatcctcagcccgagtcggagaat
cagagtggtggtggggagacgggcagtgggacgaggaagaggaagtcgcggtgggcggat
gaggagccgaaggcgattcagctgccggatttcatgggaggtattgagtttgatccagaa
attcaagctttgaatagtaggttgcttgagattagtcgaatgctgtcttcgggtttgccc
ttagatgatcgtcccgaaggggctaggtctccttcgccggaacctatatatgataacatg
ggaattaggattaatactagagagttccgtgcccgtgaaaggttgaacaaagagaggcag
gaaattattgctcagattattaagaggaacccggcatttaagcccccggctgattacagg
ccacccaagcttcataagaagctttacataccgatgaaggaatatcccggatacaatttt
atcggacttatcattgggccaagaggtaatacgcagaagaggatggagaaagaaactggt
gcaaaaattgtcattaggggtaaaggttcggtgaaagaaggcaggtcgcaacagaagagg
gatttgaaacctgacccttccgagaacgaggacttgcatgttttggttgaggcagataca
caagacgctcttgatgctgcggctgggatggtggagaaactcttgcagcctgttgatgag
gtgttgaatgagcataagaggcaacaacttagggaacttgcggcattgaatgggacaata
agggatgaggagtattgtaggttgtgtggtgagccggggcaccgtcagtatgcttgtcca
tcacgtacttcgaccttcaagagcgatgttctttgtaagatatgtggtgatggtgggcat
ccaaccattgattgcccagtgaagggtacaactgggaagaaaatggatgatgagtatcag
aacttcttggctgagttgggggggacagttcctgaatccacaactaagcagaccgctacg
ttggcacttggcccaggcaatagtacatcaagcaatcctccttgggctaacagtactagc
agcactagcagtgcatcatcacatccaggcttgggatcaactggagtcaagccggtcaag
gactatgacgagacaaacttgtacattggatacttgccgcctacccttgatgacgatggt
ttaatccgattgttttcagcgtttggtgatattgtgatggccaaagttatcagggaccgg
gttactggagcgagtaagggttatggttttgtgaagtatggagatgttcaaatggctaat
aatgcaattgcaagcatgaatggttatcgcctagagcagcgaaccattgctgtcagagtt
gccggcaagcctccgcagcctgctggacctccagcatcggcaatgcccacataccccgtt
ccccagcctgttgcttcctttccatcccagcagtttacccccggtggtcctcttgggaat
gcaccacctactagctatgcgggtactcctgttccatggggaccccctgttcctcctcct
tatgctccttatgctccgccgcctccgcctcccccgggttcaaccatgtatcctcctccc
atgccgggtcaacatatgtctccttatggtgcacgataccctcctccccctggtgcacca
cctcaaccgatgacttcaagtgaagcacaacacagttatccccctccaggagttcaatct
gaacacaatgtctctacccaatctctacaaactaatctgtatggtggctcctcagcacca
atgccaccaaacggccaacacacttatcctgctgcttcatatggttactcatcttactac
aatgcagttccaccacctccacctccccccggccctgtacctggatcaactgcagaccaa
tctcagaacattggtaacgttccatgggccacgagtgctccggttcaccctcctgcttct
tctgcggaaaagacaacttatggtgcagatgcagagtatgagaagttcatggcagaaatg
aaatga
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